RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ASB4Q9Y574 426 aa0.49□□□□□ -2.33
GCFC2-209ENST00000486016 ALPK3Q96L96 1907 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 CNTRLQ7Z7A1 2325 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 RFX7Q2KHR2 1363 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 TRAV27A0A087WT01 109 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 IGLV3-32A0A0A0MS00 114 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 OR2T8A6NH00 312 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 SNRNP200O75643 2136 aaKnown RBP0.48□□□□□ -2.33
GCFC2-209ENST00000486016 TAS2R41P59536 307 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 POU6F1Q14863 301 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 TMEM14EPQ6UXP3 125 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 ARPINQ7Z6K5 226 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 OR5AS1Q8N127 324 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 MALSU1Q96EH3 234 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 HYLS1Q96M11 299 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 TMEM138Q9NPI0 162 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 OR52A1Q9UKL2 312 aa0.48□□□□□ -2.33
GCFC2-209ENST00000486016 MYO5AQ9Y4I1 1855 aaKnown RBP0.48□□□□□ -2.33
GCFC2-209ENST00000486016 TRAV5A0A0B4J249 113 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 A0A1W2PPM0 123 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 RER1O15258 196 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 HIST1H2BKO60814 126 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 PIAS1O75925 651 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 IFNA4P05014 189 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 CSN2P05814 226 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 HIST1H2BJP06899 126 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 PPP1R2P41236 205 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 NUP35Q8NFH5 326 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 UBR2Q8IWV8 1755 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 CD109Q6YHK3 1445 aa0.47□□□□□ -2.33
GCFC2-209ENST00000486016 UNC13CQ8NB66 2214 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 TRPM1Q7Z4N2 1603 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 PHRF1Q9P1Y6 1649 aaKnown RBP0.46□□□□□ -2.34
GCFC2-209ENST00000486016 MGAMO43451 1857 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 hDV103S1A0JD37 113 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 TMEM238C9JI98 176 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 PPYP01298 95 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 EIF3IQ13347 325 aaKnown RBP0.46□□□□□ -2.34
GCFC2-209ENST00000486016 FKBP1CQ5VVH2 108 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 C1orf140Q5VVS0 124 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 LRRC18Q8N456 261 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 OR10AG1Q8NH19 301 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 PSMF1Q92530 271 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 HOPXQ9BPY8 73 aaPredicted RBP0.46□□□□□ -2.34
GCFC2-209ENST00000486016 MAP1LC3BQ9GZQ8 125 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 RNF11Q9Y3C5 154 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 UFC1Q9Y3C8 167 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 NCAPD3P42695 1498 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 NUP210LQ5VU65 1888 aa0.46□□□□□ -2.34
GCFC2-209ENST00000486016 NISCHQ9Y2I1 1504 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 COL24A1Q17RW2 1714 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 C9orf170A2RU37 121 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 C5orf67F2Z3F1 127 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 JMJD7-PLA2G4BH0Y9G9 81 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 IGLV3-1P01715 115 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 IDO1P14902 403 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 GLRXP35754 106 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 VBP1P61758 197 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 HBBP68871 147 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 LTC4SQ16873 150 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 PHF5AQ7RTV0 110 aaKnown RBP0.45□□□□□ -2.34
GCFC2-209ENST00000486016 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 PLEKHB2Q96CS7 222 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 PRRT1Q99946 306 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 RTL8AQ9BWD3 113 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 WFDC10AQ9H1F0 79 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 GID8Q9NWU2 228 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 CAMSAP2Q08AD1 1489 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 MYO18AQ92614 2054 aaKnown RBP0.45□□□□□ -2.34
GCFC2-209ENST00000486016 SIP14410 1827 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 MED12Q93074 2177 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 FRMPD1Q5SYB0 1578 aa0.45□□□□□ -2.34
GCFC2-209ENST00000486016 GPR31O00270 319 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 G0S2P27469 103 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 CRYBA4P53673 196 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 TCTAP57738 103 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 RTL8BQ17RB0 113 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 LINC00575Q6W349 94 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 STX19Q8N4C7 294 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 FAM216BQ8N7L0 139 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 CARD19Q96LW7 228 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 OR2H1Q9GZK4 316 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 OTORQ9NRC9 128 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 N4BP2Q86UW6 1770 aaPredicted RBP0.44□□□□□ -2.34
GCFC2-209ENST00000486016 FREM3P0C091 2139 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 MYLKQ15746 1914 aa0.44□□□□□ -2.34
GCFC2-209ENST00000486016 TET1Q8NFU7 2136 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 PTPRFP10586 1907 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 TRAV23DV6A0A075B6W5 121 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 LYRM1O43325 122 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 CST7O76096 145 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 SERPINB1P30740 379 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 RPL35P42766 123 aaKnown RBP0.43□□□□□ -2.34
GCFC2-209ENST00000486016 CIRBPQ14011 172 aaKnown RBP0.43□□□□□ -2.34
GCFC2-209ENST00000486016 SPATA45Q537H7 98 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 PPP1R2P3Q6NXS1 205 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 GLIPR1L1Q6UWM5 242 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 FAM24BQ8N5W8 94 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 NEK7Q8TDX7 302 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 BOLA2Q9H3K6 86 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms