RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 RAB2AP61019 212 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 ACOT6Q3I5F7 207 aaPredicted RBP8.71□□□□□ -1.02
HPS4-214ENST00000485842 GDF5OSQ5U4N7 250 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 FOXI2Q6ZQN5 318 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 OR11H4Q8NGC9 324 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 ST6GAL2Q96JF0 529 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 SLC50A1Q9BRV3 221 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 SLC25A2Q9BXI2 301 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 CSTL1Q9H114 145 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 FUT9Q9Y231 359 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 HLA-DRB4X5D2U9 266 aa8.71□□□□□ -1.02
HPS4-214ENST00000485842 H3BMM0 161 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 UBE2CO00762 179 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 OR7C2O60412 319 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 EIF3GO75821 320 aaKnown RBP eCLIP8.7□□□□□ -1.02
HPS4-214ENST00000485842 PRB4P10163 310 aaPredicted RBP8.7□□□□□ -1.02
HPS4-214ENST00000485842 CXCL2P19875 107 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 RHOBP62745 196 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 EBLN2Q6P2I7 272 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 FAM122CQ6P4D5 195 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 OR4B1Q8NGF8 309 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 FAM167A-AS1Q96KT0 104 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 PSMG3Q9BT73 122 aaPredicted RBP8.7□□□□□ -1.02
HPS4-214ENST00000485842 SH3BGRL3Q9H299 93 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 HRH4Q9H3N8 390 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 SAV1Q9H4B6 383 aaPredicted RBP8.7□□□□□ -1.02
HPS4-214ENST00000485842 ZNF331Q9NQX6 463 aaPredicted RBP8.7□□□□□ -1.02
HPS4-214ENST00000485842 ZNF586Q9NXT0 402 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 TMEM14CQ9P0S9 112 aa8.7□□□□□ -1.02
HPS4-214ENST00000485842 A0A0J9YX75 114 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 HMSDA8MTL9 139 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 OR10J4P0C629 311 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 M6PRP20645 277 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 C4BPBP20851 252 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 ZNF345Q14585 488 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 PSG3Q16557 428 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 KHDC3LQ587J8 217 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 Q6ZWC4 215 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 AKAP14Q86UN6 197 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 KCNRGQ8N5I3 272 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 OR10G4Q8NGN3 311 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 OR10G9Q8NGN4 311 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 OR10G7Q8NGN6 311 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 OR2G3Q8NGZ4 309 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 BLNKQ8WV28 456 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 OVOL2Q9BRP0 275 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 PAXXQ9BUH6 204 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 TENM3Q9P273 2699 aa8.69□□□□□ -1.02
HPS4-214ENST00000485842 TRBV19A0A075B6N1 114 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 A0A1B0GVG6 124 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 A0A1W2PPV4 95 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 TAAR5O14804 337 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 SPRY2O43597 315 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 JTBO76095 146 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 ZNF705DP0CH99 300 aaPredicted RBP8.68□□□□□ -1.02
HPS4-214ENST00000485842 ZNF705BP0CI00 300 aaPredicted RBP8.68□□□□□ -1.02
HPS4-214ENST00000485842 HIST1H1EP10412 219 aaKnown RBP8.68□□□□□ -1.02
HPS4-214ENST00000485842 SPP1P10451 314 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 FXYD7P58549 80 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 TAS2R45P59539 299 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 UBE2L3P68036 154 aaKnown RBP8.68□□□□□ -1.02
HPS4-214ENST00000485842 HIST1H1AQ02539 215 aaPredicted RBP8.68□□□□□ -1.02
HPS4-214ENST00000485842 GUK1Q16774 197 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 MORN3Q6PF18 240 aaPredicted RBP8.68□□□□□ -1.02
HPS4-214ENST00000485842 TCTE3Q8IZS6 198 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 RPUSD4Q96CM3 377 aaKnown RBP8.68□□□□□ -1.02
HPS4-214ENST00000485842 GNPNAT1Q96EK6 184 aaPredicted RBP8.68□□□□□ -1.02
HPS4-214ENST00000485842 ARPC5LQ9BPX5 153 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 OR51M1Q9H341 326 aa8.68□□□□□ -1.02
HPS4-214ENST00000485842 ZNF705FA8MVS1 300 aaPredicted RBP8.67□□□□□ -1.02
HPS4-214ENST00000485842 HMGB3O15347 200 aaKnown RBP8.67□□□□□ -1.02
HPS4-214ENST00000485842 PFDN1O60925 122 aa8.67□□□□□ -1.02
HPS4-214ENST00000485842 CDC34P49427 236 aaPredicted RBP8.67□□□□□ -1.02
HPS4-214ENST00000485842 NUTF2P61970 127 aaKnown RBP8.67□□□□□ -1.02
HPS4-214ENST00000485842 NBEAL2Q6ZNJ1 2754 aa8.67□□□□□ -1.02
HPS4-214ENST00000485842 RNF141Q8WVD5 230 aa8.67□□□□□ -1.02
HPS4-214ENST00000485842 RNF183Q96D59 192 aa8.67□□□□□ -1.02
HPS4-214ENST00000485842 SAT2Q96F10 170 aaPredicted RBP8.67□□□□□ -1.02
HPS4-214ENST00000485842 CYTL1Q9NRR1 136 aa8.67□□□□□ -1.02
HPS4-214ENST00000485842 CLEC5AQ9NY25 188 aa8.67□□□□□ -1.02
HPS4-214ENST00000485842 TP53TG1Q9Y2A0 90 aa8.67□□□□□ -1.02
HPS4-214ENST00000485842 A0A0D9SG52 128 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 KANTRA0A1W2PQU2 76 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 BCL2L11O43521 198 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 ZNF253O75346 499 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 DUSP14O95147 198 aaKnown RBP8.66□□□□□ -1.02
HPS4-214ENST00000485842 NDUFB4O95168 129 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 MBP02144 154 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 GIG44P09565 113 aaPredicted RBP8.66□□□□□ -1.02
HPS4-214ENST00000485842 NBEAP1P0C6P0 100 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 CNN1P51911 297 aaKnown RBP8.66□□□□□ -1.02
HPS4-214ENST00000485842 SERF2P84101 59 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 PDE6HQ13956 83 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 TMEM41BQ5BJD5 291 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 OR8A1Q8NGG7 326 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 FXYD5Q96DB9 178 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 ZNF503Q96F45 646 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 PHYHIPLQ96FC7 376 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 ZNF471Q9BX82 626 aaPredicted RBP8.66□□□□□ -1.02
HPS4-214ENST00000485842 SLC35B3Q9H1N7 401 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms