RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 GPR82Q96P67 336 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 RSG1Q9BU20 258 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 PAIP2BQ9ULR5 123 aaKnown RBP9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 SLC45A2Q9UMX9 530 aa9.65□□□□□ -0.86
SMARCD3-211ENST00000485592 ZNF98A6NK75 572 aa9.64□□□□□ -0.87
SMARCD3-211ENST00000485592 CCNKO75909 580 aa9.64□□□□□ -0.87
SMARCD3-211ENST00000485592 CLINT1Q14677 625 aa9.64□□□□□ -0.87
SMARCD3-211ENST00000485592 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.64□□□□□ -0.87
SMARCD3-211ENST00000485592 THAP8Q8NA92 274 aa9.64□□□□□ -0.87
SMARCD3-211ENST00000485592 CIB3Q96Q77 187 aaPredicted RBP9.64□□□□□ -0.87
SMARCD3-211ENST00000485592 IGKV1OR2-108A0A075B7D4 117 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 PRAF2O60831 178 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 SCGB1D2O95969 90 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 PRM2P04554 102 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 RPP30P78346 268 aaKnown RBP9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 SPANXN5Q5MJ07 72 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 TMEM14EPQ6UXP3 125 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 BAP18Q8IXM2 172 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 Q8N1X5 172 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 BPIFCQ8NFQ6 507 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 SMIM8Q96KF7 97 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 TMEM147Q9BVK8 224 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 GSKIPQ9P0R6 139 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 LINC00588Q9Y4M8 146 aa9.63□□□□□ -0.87
SMARCD3-211ENST00000485592 C7orf66A4D0T2 115 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 CBY3A6NI87 242 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 FAM25EA8MYX2 175 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 BOLA2-SMG1P6H3BVE0 249 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 K7EPK0 472 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 PTTG1O95997 202 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 ORM2P19652 201 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 FGL1Q08830 312 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 ACOT7LQ6ZUV0 252 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 SPATA12Q7Z6I5 190 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 TMEM256Q8N2U0 113 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 ZNF738Q8NE65 137 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 C16orf74Q96GX8 76 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 C2orf50Q96LR7 162 aa9.62□□□□□ -0.87
SMARCD3-211ENST00000485592 TRAV12-2A0A075B6T6 113 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 C5orf51A6NDU8 294 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 SIX6O95475 246 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 FCN2Q15485 313 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 TTC32Q5I0X7 151 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 SSX7Q7RTT5 188 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 RNF141Q8WVD5 230 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 LINC01587Q99440 93 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 GPN1Q9HCN4 374 aaPredicted RBP9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 PPP1R14DQ9NXH3 145 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 PSENENQ9NZ42 101 aa9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 STRAPQ9Y3F4 350 aaKnown RBP9.61□□□□□ -0.87
SMARCD3-211ENST00000485592 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 GOSR2O14653 212 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 TSC22D2O75157 780 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 HTN1P15515 57 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 AZU1P20160 251 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 H2BFSP57053 126 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 TAS2R30P59541 319 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 TAS2R60P59551 318 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 RHOBP62745 196 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 AKR1C1Q04828 323 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 ARL16Q0P5N6 197 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 RAB32Q13637 225 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 IGFL4Q6B9Z1 124 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 RNF182Q8N6D2 247 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 C17orf77Q96MU5 243 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 SLC25A39Q9BZJ4 359 aaPredicted RBP9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 SCRT2Q9NQ03 307 aa9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 TIMM8BQ9Y5J9 83 aaPredicted RBP9.6□□□□□ -0.87
SMARCD3-211ENST00000485592 TRAV8-2A0A0B4J237 113 aa9.59□□□□□ -0.87
SMARCD3-211ENST00000485592 METTL15P1P0C7V9 234 aa9.59□□□□□ -0.87
SMARCD3-211ENST00000485592 GATA2P23769 480 aaPredicted RBP9.59□□□□□ -0.87
SMARCD3-211ENST00000485592 RAP2BP61225 183 aa9.59□□□□□ -0.87
SMARCD3-211ENST00000485592 HIST1H1AQ02539 215 aaPredicted RBP9.59□□□□□ -0.87
SMARCD3-211ENST00000485592 OR10J6PQ8NGY7 276 aa9.59□□□□□ -0.87
SMARCD3-211ENST00000485592 Q9H8V8 135 aa9.59□□□□□ -0.87
SMARCD3-211ENST00000485592 LSM5Q9Y4Y9 91 aaKnown RBP9.59□□□□□ -0.87
SMARCD3-211ENST00000485592 LRP1BQ9NZR2 4599 aa9.59□□□□□ -0.87
SMARCD3-211ENST00000485592 H3BRN7 92 aa9.58□□□□□ -0.88
SMARCD3-211ENST00000485592 RPL7P18124 248 aaKnown RBP9.58□□□□□ -0.88
SMARCD3-211ENST00000485592 TMEM144Q7Z5S9 345 aa9.58□□□□□ -0.88
SMARCD3-211ENST00000485592 ALG5Q9Y673 324 aa9.58□□□□□ -0.88
SMARCD3-211ENST00000485592 H0YIZ8 118 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 S100A10P60903 97 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 DLK1P80370 383 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 OR5I1Q13606 314 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 TMEM182Q6ZP80 229 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 ZNF493Q6ZR52 646 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 S100A7AQ86SG5 101 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 OR8A1Q8NGG7 326 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 LRRC20Q8TCA0 184 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 TMEM263Q8WUH6 116 aaKnown RBP9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 GNPNAT1Q96EK6 184 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 NMES1Q9C002 83 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 Q9H3A6 140 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 NOP10Q9NPE3 64 aaKnown RBP9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 HIGD1AQ9Y241 93 aa9.57□□□□□ -0.88
SMARCD3-211ENST00000485592 IGSF23A1L1A6 192 aa9.56□□□□□ -0.88
SMARCD3-211ENST00000485592 SMCO3A2RU48 225 aa9.56□□□□□ -0.88
SMARCD3-211ENST00000485592 FAM24AA6NFZ4 105 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms