RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 UBE2L3P68036 154 aaKnown RBP13.18□□□□□ -0.3
CHMP3-207ENST00000485465 GUK1Q16774 197 aa13.18□□□□□ -0.3
CHMP3-207ENST00000485465 DCANP1Q8TF63 244 aa13.18□□□□□ -0.3
CHMP3-207ENST00000485465 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
CHMP3-207ENST00000485465 TRBV19A0A075B6N1 114 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 G3V4G9 280 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 H3BTX0 84 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 K7EQG2 157 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 BLOC1S1P78537 153 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 IFITM2Q01629 132 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 SAMD5Q5TGI4 173 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 SUN5Q8TC36 379 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 BLNKQ8WV28 456 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 SAT2Q96F10 170 aaPredicted RBP13.17□□□□□ -0.3
CHMP3-207ENST00000485465 ZNF256Q9Y2P7 627 aaPredicted RBP13.17□□□□□ -0.3
CHMP3-207ENST00000485465 PKD1L1Q8TDX9 2849 aa13.17□□□□□ -0.3
CHMP3-207ENST00000485465 TRAV1-1A0A0B4J248 108 aa13.16□□□□□ -0.3
CHMP3-207ENST00000485465 OR4C46A6NHA9 309 aa13.16□□□□□ -0.3
CHMP3-207ENST00000485465 SOCS3O14543 225 aa13.16□□□□□ -0.3
CHMP3-207ENST00000485465 BEAN1Q3B7T3 259 aa13.16□□□□□ -0.3
CHMP3-207ENST00000485465 IQCF2Q8IXL9 164 aa13.16□□□□□ -0.3
CHMP3-207ENST00000485465 LRRC20Q8TCA0 184 aa13.16□□□□□ -0.3
CHMP3-207ENST00000485465 TMPRSS5Q9H3S3 457 aa13.16□□□□□ -0.3
CHMP3-207ENST00000485465 TMEM167BQ9NRX6 74 aa13.16□□□□□ -0.3
CHMP3-207ENST00000485465 A0A1B0GV50 99 aa13.15□□□□□ -0.3
CHMP3-207ENST00000485465 EGFEM1PQ0D2K5 195 aa13.15□□□□□ -0.3
CHMP3-207ENST00000485465 PDE6HQ13956 83 aa13.15□□□□□ -0.3
CHMP3-207ENST00000485465 SAMD13Q5VXD3 122 aa13.15□□□□□ -0.3
CHMP3-207ENST00000485465 C16orf92Q96LL3 132 aa13.15□□□□□ -0.3
CHMP3-207ENST00000485465 TEX46H3BTG2 121 aa13.14□□□□□ -0.31
CHMP3-207ENST00000485465 SLC17A3O00476 420 aa13.14□□□□□ -0.31
CHMP3-207ENST00000485465 ZNF253O75346 499 aa13.14□□□□□ -0.31
CHMP3-207ENST00000485465 NDUFB4O95168 129 aa13.14□□□□□ -0.31
CHMP3-207ENST00000485465 HBE1P02100 147 aa13.14□□□□□ -0.31
CHMP3-207ENST00000485465 ZNF767PQ75MW2 155 aa13.14□□□□□ -0.31
CHMP3-207ENST00000485465 FAM24BQ8N5W8 94 aa13.14□□□□□ -0.31
CHMP3-207ENST00000485465 SLC50A1Q9BRV3 221 aa13.14□□□□□ -0.31
CHMP3-207ENST00000485465 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-207ENST00000485465 ZMAT5Q9UDW3 170 aaKnown RBP13.14□□□□□ -0.31
CHMP3-207ENST00000485465 TRAV8-2A0A0B4J237 113 aa13.13□□□□□ -0.31
CHMP3-207ENST00000485465 ISLRO14498 428 aa13.13□□□□□ -0.31
CHMP3-207ENST00000485465 ID1P41134 155 aa13.13□□□□□ -0.31
CHMP3-207ENST00000485465 PSMB3P49720 205 aa13.13□□□□□ -0.31
CHMP3-207ENST00000485465 KRTAP10-11P60412 298 aa13.13□□□□□ -0.31
CHMP3-207ENST00000485465 CCL20P78556 96 aa13.13□□□□□ -0.31
CHMP3-207ENST00000485465 PSG9Q00887 426 aa13.13□□□□□ -0.31
CHMP3-207ENST00000485465 IGFL4Q6B9Z1 124 aa13.12□□□□□ -0.31
CHMP3-207ENST00000485465 ZNF688P0C7X2 276 aa13.11□□□□□ -0.31
CHMP3-207ENST00000485465 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
CHMP3-207ENST00000485465 RANP62826 216 aaKnown RBP13.11□□□□□ -0.31
CHMP3-207ENST00000485465 LYPD1Q8N2G4 141 aa13.11□□□□□ -0.31
CHMP3-207ENST00000485465 LYPD6BQ8NI32 183 aa13.11□□□□□ -0.31
CHMP3-207ENST00000485465 PCNPQ8WW12 178 aaKnown RBP13.11□□□□□ -0.31
CHMP3-207ENST00000485465 C20orf173Q96LM9 149 aa13.11□□□□□ -0.31
CHMP3-207ENST00000485465 LINC00052Q96N35 136 aa13.11□□□□□ -0.31
CHMP3-207ENST00000485465 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
CHMP3-207ENST00000485465 NMBP08949 121 aa13.1□□□□□ -0.31
CHMP3-207ENST00000485465 CD7P09564 240 aa13.1□□□□□ -0.31
CHMP3-207ENST00000485465 HLA-DMBP28068 263 aa13.1□□□□□ -0.31
CHMP3-207ENST00000485465 PPT1P50897 306 aa13.1□□□□□ -0.31
CHMP3-207ENST00000485465 CMC4P56277 68 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-207ENST00000485465 EXOC3-AS1Q8N2X6 119 aa13.1□□□□□ -0.31
CHMP3-207ENST00000485465 RNF182Q8N6D2 247 aa13.1□□□□□ -0.31
CHMP3-207ENST00000485465 Q9H3A6 140 aa13.1□□□□□ -0.31
CHMP3-207ENST00000485465 CLEC5AQ9NY25 188 aa13.1□□□□□ -0.31
CHMP3-207ENST00000485465 A0A1W2PRE2 83 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 CD81P60033 236 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 UBE2G2P60604 165 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 RAB14P61106 215 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 ICAM4Q14773 271 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 PSG3Q16557 428 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 ODF3L2Q3SX64 289 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 PSMG4Q5JS54 123 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 KPRPQ5T749 579 aaPredicted RBP13.09□□□□□ -0.31
CHMP3-207ENST00000485465 GTSCR1Q86UQ5 136 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 PRR25Q96S07 402 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 AAMDCQ9H7C9 122 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 MAP6D1Q9H9H5 199 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 OTORQ9NRC9 128 aa13.09□□□□□ -0.31
CHMP3-207ENST00000485465 YTHDF2Q9Y5A9 579 aaKnown RBP13.09□□□□□ -0.31
CHMP3-207ENST00000485465 PGPA6NDG6 321 aa13.08□□□□□ -0.32
CHMP3-207ENST00000485465 FAM74A7A6NL05 159 aa13.08□□□□□ -0.32
CHMP3-207ENST00000485465 OR11H12B2RN74 326 aa13.08□□□□□ -0.32
CHMP3-207ENST00000485465 DEFB131AP59861 70 aa13.08□□□□□ -0.32
CHMP3-207ENST00000485465 PMS2P11Q13670 270 aa13.08□□□□□ -0.32
CHMP3-207ENST00000485465 FAM110AQ9BQ89 295 aa13.08□□□□□ -0.32
CHMP3-207ENST00000485465 C19orf73Q9NVV2 129 aa13.08□□□□□ -0.32
CHMP3-207ENST00000485465 GNG13Q9P2W3 67 aa13.08□□□□□ -0.32
CHMP3-207ENST00000485465 PRELID1Q9Y255 219 aa13.08□□□□□ -0.32
CHMP3-207ENST00000485465 PAGE4O60829 102 aa13.07□□□□□ -0.32
CHMP3-207ENST00000485465 ZNF738Q8NE65 137 aa13.07□□□□□ -0.32
CHMP3-207ENST00000485465 MRPL53Q96EL3 112 aaKnown RBP13.07□□□□□ -0.32
CHMP3-207ENST00000485465 MANBALQ9NQG1 85 aa13.07□□□□□ -0.32
CHMP3-207ENST00000485465 ARL2-SNX15V9GYD0 113 aa13.07□□□□□ -0.32
CHMP3-207ENST00000485465 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-207ENST00000485465 GGTLC3B5MD39 225 aa13.06□□□□□ -0.32
CHMP3-207ENST00000485465 M0R3E3 92 aa13.06□□□□□ -0.32
CHMP3-207ENST00000485465 RGS13O14921 159 aa13.06□□□□□ -0.32
CHMP3-207ENST00000485465 SUMO1P63165 101 aaKnown RBP13.06□□□□□ -0.32
CHMP3-207ENST00000485465 Q8N1Y9 231 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms