RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SIGLEC15Q6ZMC9 328 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 ZNF503Q96F45 646 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 ZNF414Q96IQ9 312 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 RAX2Q96IS3 184 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 RHPN1-AS1Q9BWJ2 59 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 TMPRSS5Q9H3S3 457 aa10.65□□□□□ -0.7
SMAD9-204ENST00000483941 A0A087X0K7 114 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 C11orf94C9JXX5 98 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 CHEK1O14757 476 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 IGLC2P0DOY2 106 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 PYYP10082 97 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 NSUN5P1Q3KNT7 163 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 RPUSD4Q96CM3 377 aaKnown RBP10.64□□□□□ -0.71
SMAD9-204ENST00000483941 CITED4Q96RK1 184 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 SLC50A1Q9BRV3 221 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 SLC35B3Q9H1N7 401 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 AAMDCQ9H7C9 122 aa10.64□□□□□ -0.71
SMAD9-204ENST00000483941 TRBV19A0A075B6N1 114 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 TMEM213A2RRL7 107 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 FAM74A7A6NL05 159 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 KRBOX1C9JBD0 128 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 TMEM250H0YL14 139 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 EIF3GO75821 320 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMAD9-204ENST00000483941 PF4P02776 101 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 CBLN1P23435 193 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 SLURP1P55000 103 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 PAFAH1B2P68402 229 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 SLC7A5P1Q8MH63 180 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 ARL6IP6Q8N6S5 226 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 RXFP4Q8TDU9 374 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 BLNKQ8WV28 456 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 GLMPQ8WWB7 406 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 CITED1Q99966 193 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 OTORQ9NRC9 128 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 SIGLEC8Q9NYZ4 499 aa10.63□□□□□ -0.71
SMAD9-204ENST00000483941 OVOL1O14753 267 aa10.62□□□□□ -0.71
SMAD9-204ENST00000483941 MRPS12O15235 138 aaKnown RBP10.62□□□□□ -0.71
SMAD9-204ENST00000483941 FOLR2P14207 255 aa10.62□□□□□ -0.71
SMAD9-204ENST00000483941 UBE2G2P60604 165 aa10.62□□□□□ -0.71
SMAD9-204ENST00000483941 RANP62826 216 aaKnown RBP10.62□□□□□ -0.71
SMAD9-204ENST00000483941 RPL11P62913 178 aaKnown RBP10.62□□□□□ -0.71
SMAD9-204ENST00000483941 ICAM4Q14773 271 aa10.62□□□□□ -0.71
SMAD9-204ENST00000483941 CMTM2Q8TAZ6 248 aa10.62□□□□□ -0.71
SMAD9-204ENST00000483941 DLX4Q92988 240 aaPredicted RBP10.62□□□□□ -0.71
SMAD9-204ENST00000483941 RARRES2Q99969 163 aa10.62□□□□□ -0.71
SMAD9-204ENST00000483941 ZNF586Q9NXT0 402 aa10.62□□□□□ -0.71
SMAD9-204ENST00000483941 PRELID1Q9Y255 219 aa10.62□□□□□ -0.71
SMAD9-204ENST00000483941 IGHV3-49A0A0A0MS15 119 aa10.61□□□□□ -0.71
SMAD9-204ENST00000483941 APOHP02749 345 aaPredicted RBP10.61□□□□□ -0.71
SMAD9-204ENST00000483941 CSN1S1P47710 185 aa10.61□□□□□ -0.71
SMAD9-204ENST00000483941 FAM74A3Q4VXF1 159 aa10.61□□□□□ -0.71
SMAD9-204ENST00000483941 HIST1H2BAQ96A08 127 aa10.61□□□□□ -0.71
SMAD9-204ENST00000483941 IGHV3OR16-13A0A075B7E8 117 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 IGHV3-74A0A0B4J1X5 117 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 IGHV3-66A0A0C4DH42 116 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 SERTM2A0A1B0GWG4 89 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 ADARB2-AS1A8MUL3 147 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 H3BQ15 152 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 K7EQM0 130 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 S100A1P23297 94 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 ID1P41134 155 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 SUMO1P63165 101 aaKnown RBP10.6□□□□□ -0.71
SMAD9-204ENST00000483941 TCF24Q7RTU0 167 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 C5orf17Q8NAS9 161 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 DYNLRB2Q8TF09 96 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 DUX3Q96PT4 197 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 Q9H3A6 140 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 NRN1Q9NPD7 142 aa10.6□□□□□ -0.71
SMAD9-204ENST00000483941 YTHDF2Q9Y5A9 579 aaKnown RBP10.6□□□□□ -0.71
SMAD9-204ENST00000483941 TRAV25A0A0B4J276 109 aa10.59□□□□□ -0.71
SMAD9-204ENST00000483941 TMEM218A2RU14 115 aa10.59□□□□□ -0.71
SMAD9-204ENST00000483941 PGPA6NDG6 321 aa10.59□□□□□ -0.71
SMAD9-204ENST00000483941 FBLL1A6NHQ2 334 aaKnown RBP10.59□□□□□ -0.71
SMAD9-204ENST00000483941 S100A9P06702 114 aaKnown RBP10.59□□□□□ -0.71
SMAD9-204ENST00000483941 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
SMAD9-204ENST00000483941 CD81P60033 236 aa10.59□□□□□ -0.71
SMAD9-204ENST00000483941 KRTAP10-3P60369 221 aa10.59□□□□□ -0.71
SMAD9-204ENST00000483941 SOHLH1Q5JUK2 328 aa10.59□□□□□ -0.71
SMAD9-204ENST00000483941 RBPMS2Q6ZRY4 209 aaKnown RBP10.59□□□□□ -0.71
SMAD9-204ENST00000483941 CCDC28AQ8IWP9 274 aa10.59□□□□□ -0.71
SMAD9-204ENST00000483941 MRPL53Q96EL3 112 aaKnown RBP10.59□□□□□ -0.71
SMAD9-204ENST00000483941 C16orf92Q96LL3 132 aa10.59□□□□□ -0.71
SMAD9-204ENST00000483941 MLXQ9UH92 298 aa10.59□□□□□ -0.71
SMAD9-204ENST00000483941 TRAV2A0A0B4J234 112 aa10.58□□□□□ -0.72
SMAD9-204ENST00000483941 DNASE2O00115 360 aaPredicted RBP10.58□□□□□ -0.72
SMAD9-204ENST00000483941 ISLRO14498 428 aa10.58□□□□□ -0.72
SMAD9-204ENST00000483941 SLC25A5P05141 298 aaKnown RBP10.58□□□□□ -0.72
SMAD9-204ENST00000483941 CSN3P07498 182 aa10.58□□□□□ -0.72
SMAD9-204ENST00000483941 SFTA3P0C7M3 94 aa10.58□□□□□ -0.72
SMAD9-204ENST00000483941 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.58□□□□□ -0.72
SMAD9-204ENST00000483941 OR2K2Q8NGT1 345 aa10.58□□□□□ -0.72
SMAD9-204ENST00000483941 SEC11CQ9BY50 192 aa10.58□□□□□ -0.72
SMAD9-204ENST00000483941 ZNF331Q9NQX6 463 aaPredicted RBP10.58□□□□□ -0.72
SMAD9-204ENST00000483941 EPDR1Q9UM22 224 aa10.58□□□□□ -0.72
SMAD9-204ENST00000483941 SMAD5-AS1Q9Y6J3 95 aa10.58□□□□□ -0.72
SMAD9-204ENST00000483941 F8W036 122 aa10.57□□□□□ -0.72
SMAD9-204ENST00000483941 NDUFB4O95168 129 aa10.57□□□□□ -0.72
SMAD9-204ENST00000483941 ATP5G3P48201 142 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms