RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 STXBP6Q8NFX7 210 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 ZNF502Q8TBZ5 544 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 ATP6V0BQ99437 205 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 SHANK2-AS3Q9BTD1 123 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 KLK9Q9UKQ9 250 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 PGPA6NDG6 321 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 C9JCJ5 164 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 IGHV4-59P01825 116 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 FCGR2BP31994 310 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 GALR1P47211 349 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 PKIAP61925 76 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 C4orf48Q5BLP8 95 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 FAM210BQ96KR6 192 aa6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 GAR1Q9NY12 217 aaKnown RBP6.87□□□□□ -1.31
CDC42SE1-204ENST00000483763 TRAV30A0A087WSZ9 112 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 TRAV41A0A0B4J266 112 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 H3BRN7 92 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 ISLRO14498 428 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 MRPS12O15235 138 aaKnown RBP6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 S100A2P29034 98 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 GNG4P50150 75 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 SLAQ13239 276 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 EXOC3-AS1Q8N2X6 119 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 IGF2BP2-AS1Q96M15 143 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 TRBV24-1A0A075B6N3 115 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 SLC17A3O00476 420 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 TRGC2P03986 189 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 IGLC2P0DOY2 106 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 CLEC19AQ6UXS0 136 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 VN1R17PQ8TDU5 208 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 PACRGQ96M98 296 aaPredicted RBP6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 TMEM208Q9BTX3 173 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 Q9H3A6 140 aa6.86□□□□□ -1.31
CDC42SE1-204ENST00000483763 PEX7O00628 323 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 PHOX2AO14813 284 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 IGHG2P01859 326 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 IGF1P05019 195 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 NPSP0C0P6 89 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 PPIFP30405 207 aaKnown RBP6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 NUDT11Q96G61 164 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 PYGO2Q9BRQ0 406 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 RNASE7Q9H1E1 156 aaKnown RBP6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 KLK15Q9H2R5 256 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 TMEM14CQ9P0S9 112 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 EPDR1Q9UM22 224 aa6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 ANK3Q12955 4377 aaKnown RBP6.85□□□□□ -1.31
CDC42SE1-204ENST00000483763 J3QLI3 93 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 SLC25A5P05141 298 aaKnown RBP6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 HIST1H1EP10412 219 aaKnown RBP6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 CD99P14209 185 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 CRIP2P52943 208 aaPredicted RBP6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 RPL15P61313 204 aaKnown RBP6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 DMRTA1Q5VZB9 504 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 TOMM20LQ6UXN7 152 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 CDC42EP3Q9UKI2 254 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 TRBV19A0A075B6N1 114 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 TRAV8-1A0A0A6YYK1 113 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 CLPSL1A2RUU4 121 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 PPP5D1E7EU14 171 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 TRBV12-3P01733 135 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 IER3P46695 156 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 BPIFA4PQ86YQ2 179 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 HIST3H2BBQ8N257 126 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 OR10D4PQ8NGN7 298 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 SPXQ9BT56 116 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 ZFAND3Q9H8U3 227 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 LY96Q9Y6Y9 160 aa6.84□□□□□ -1.31
CDC42SE1-204ENST00000483763 FN1P02751 2386 aaKnown RBP6.84□□□□□ -1.32
CDC42SE1-204ENST00000483763 TSTD3H0UI37 97 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 FSHBP01225 129 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 GCGP01275 180 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 FRMD6-AS1P0C7T7 363 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 ERVFC1-1P60608 527 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 OR5R1Q8NH85 324 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 OR5B12Q96R08 314 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 ATG101Q9BSB4 218 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 V9GYV3 84 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 NSD1Q96L73 2696 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 C2CD3Q4AC94 2353 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGHV3OR16-13A0A075B7E8 117 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGHV3-74A0A0B4J1X5 117 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 GGCTO75223 188 aaKnown RBP6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 CA1P00915 261 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 APOHP02749 345 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 TRGV3P03979 118 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 TCRAP04437 139 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 MGST1P10620 155 aaKnown RBP6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 SIGLEC15Q6ZMC9 328 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 S100A7AQ86SG5 101 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 ASCL2Q99929 193 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 GNB4Q9HAV0 340 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 KLF12Q9Y4X4 402 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 SMAD5-AS1Q9Y6J3 95 aa6.83□□□□□ -1.32
CDC42SE1-204ENST00000483763 M0R3E3 92 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST1H2BKO60814 126 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGLV2-11P01706 119 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST1H2BJP06899 126 aa6.82□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIST1H2BOP23527 126 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms