RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CXCL1P09341 107 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 PSG9Q00887 426 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 OR10G8Q8NGN5 311 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 SMIM12Q96EX1 92 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 TRAV34A0A0B4J273 112 aa10.77□□□□□ -0.69
CLK3-204ENST00000483723 APOHP02749 345 aaPredicted RBP10.77□□□□□ -0.69
CLK3-204ENST00000483723 HNF1AP20823 631 aa10.77□□□□□ -0.69
CLK3-204ENST00000483723 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
CLK3-204ENST00000483723 BAGE2Q86Y30 109 aa10.77□□□□□ -0.69
CLK3-204ENST00000483723 FMC1Q96HJ9 113 aa10.77□□□□□ -0.69
CLK3-204ENST00000483723 DUX5Q96PT3 197 aa10.77□□□□□ -0.69
CLK3-204ENST00000483723 OSTCQ9NRP0 149 aa10.77□□□□□ -0.69
CLK3-204ENST00000483723 ZFHX3Q15911 3703 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 TGIF2-C20orf24A0A0A6YYL0 155 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 DNAJC9-AS1A6NH13 148 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 IGLV2-11P01706 119 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 GALR1P47211 349 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 C16orf54Q6UWD8 224 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 GPHB5Q86YW7 130 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 CMTM2Q8TAZ6 248 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 MLST8Q9BVC4 326 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
CLK3-204ENST00000483723 RPLP1P05386 114 aaKnown RBP10.75□□□□□ -0.69
CLK3-204ENST00000483723 ATF4P18848 351 aaPredicted RBP10.75□□□□□ -0.69
CLK3-204ENST00000483723 FOXL1Q12952 345 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 OR5I1Q13606 314 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 OR5B12Q96R08 314 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 ESM1Q9NQ30 184 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 ZNF331Q9NQX6 463 aaPredicted RBP10.75□□□□□ -0.69
CLK3-204ENST00000483723 DIRC3C9JPN6 131 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 K7EMT4 169 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 LTAP01374 205 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 UBE2G1P62253 170 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 FAM231DQ6ZW35 169 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 C1QL4Q86Z23 238 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 GLMPQ8WWB7 406 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 UBE2E2Q96LR5 201 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
CLK3-204ENST00000483723 SERTM2A0A1B0GWG4 89 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 FAM181BA6NEQ2 426 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 ZNF785A8K8V0 405 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 ZNF207O43670 478 aaKnown RBP10.74□□□□□ -0.69
CLK3-204ENST00000483723 MEOX2P50222 304 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 SCGB2A2Q13296 93 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 Q6ZSV7 163 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 TMEM75Q8N9X5 138 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 FAM210BQ96KR6 192 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 V9GYV3 84 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 CCDC168Q8NDH2 2452 aa10.74□□□□□ -0.69
CLK3-204ENST00000483723 M0R3E3 92 aa10.73□□□□□ -0.69
CLK3-204ENST00000483723 LGALS1P09382 135 aaKnown RBP10.73□□□□□ -0.69
CLK3-204ENST00000483723 S100PP25815 95 aa10.73□□□□□ -0.69
CLK3-204ENST00000483723 ERVFC1-1P60608 527 aa10.73□□□□□ -0.69
CLK3-204ENST00000483723 GOLT1AQ6ZVE7 132 aa10.73□□□□□ -0.69
CLK3-204ENST00000483723 RPH3ALQ9UNE2 315 aa10.73□□□□□ -0.69
CLK3-204ENST00000483723 ZNF469Q96JG9 3925 aaPredicted RBP10.73□□□□□ -0.69
CLK3-204ENST00000483723 IGHV3-66A0A0C4DH42 116 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 SGK494Q96LW2 274 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 SLC50A1Q9BRV3 221 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 IL36BQ9NZH7 164 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 MXRA5Q9NR99 2828 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 FLNAP21333 2647 aaKnown RBP10.72□□□□□ -0.69
CLK3-204ENST00000483723 IGHV3OR16-13A0A075B7E8 117 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 IGHV3-49A0A0A0MS15 119 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 IGHV3-74A0A0B4J1X5 117 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 LOC105371267A0A1B0GV96 52 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 A0A1W2PS18 150 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 K7EQM0 130 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 LY6G6DO95868 133 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 MGST1P10620 155 aaKnown RBP10.72□□□□□ -0.69
CLK3-204ENST00000483723 CSN1S1P47710 185 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 PSG3Q16557 428 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 FAM106AQ4KMX7 169 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 KCNIP4Q6PIL6 250 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 Q86TA4 180 aa10.72□□□□□ -0.69
CLK3-204ENST00000483723 WIPF2Q8TF74 440 aaPredicted RBP10.72□□□□□ -0.69
CLK3-204ENST00000483723 RNASE7Q9H1E1 156 aaKnown RBP10.72□□□□□ -0.69
CLK3-204ENST00000483723 TRAV8-1A0A0A6YYK1 113 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 ZNF320A2RRD8 509 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 C1orf196B1AJZ1 125 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 TYMSP04818 313 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 RNASE1P07998 156 aaKnown RBP10.71□□□□□ -0.69
CLK3-204ENST00000483723 FLI1Q01543 452 aaPredicted RBP10.71□□□□□ -0.69
CLK3-204ENST00000483723 IBA57Q5T440 356 aaKnown RBP10.71□□□□□ -0.69
CLK3-204ENST00000483723 KLHDC1Q8N7A1 406 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 NHLRC2Q8NBF2 726 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 SMR3AQ99954 134 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 BIN3Q9NQY0 253 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 ZNF492Q9P255 531 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 MLXQ9UH92 298 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 SMPXQ9UHP9 88 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 PSG8Q9UQ74 426 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 ZFP30Q9Y2G7 519 aa10.71□□□□□ -0.69
CLK3-204ENST00000483723 TRAV9-1A0A075B6T8 112 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 TRAV8-2A0A0B4J237 113 aa10.7□□□□□ -0.7
CLK3-204ENST00000483723 FBLL1A6NHQ2 334 aaKnown RBP10.7□□□□□ -0.7
CLK3-204ENST00000483723 RPS10P46783 165 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms