RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 FGL1Q08830 312 aa13.08□□□□□ -0.32
HDAC6-225ENST00000483506 ZFAND6Q6FIF0 208 aa13.08□□□□□ -0.32
HDAC6-225ENST00000483506 SLC50A1Q9BRV3 221 aa13.08□□□□□ -0.32
HDAC6-225ENST00000483506 PARD6GQ9BYG4 376 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-225ENST00000483506 HRH4Q9H3N8 390 aa13.08□□□□□ -0.32
HDAC6-225ENST00000483506 LYSTQ99698 3801 aa13.07□□□□□ -0.32
HDAC6-225ENST00000483506 GIPP09681 153 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-225ENST00000483506 FAM78BQ5VT40 261 aa13.07□□□□□ -0.32
HDAC6-225ENST00000483506 IGFL4Q6B9Z1 124 aa13.07□□□□□ -0.32
HDAC6-225ENST00000483506 RNF182Q8N6D2 247 aa13.07□□□□□ -0.32
HDAC6-225ENST00000483506 Q8NAQ8 132 aa13.07□□□□□ -0.32
HDAC6-225ENST00000483506 ZNF331Q9NQX6 463 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-225ENST00000483506 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
HDAC6-225ENST00000483506 X6R8D5 127 aa13.07□□□□□ -0.32
HDAC6-225ENST00000483506 TRAV5A0A0B4J249 113 aa13.06□□□□□ -0.32
HDAC6-225ENST00000483506 PSG9Q00887 426 aa13.06□□□□□ -0.32
HDAC6-225ENST00000483506 PSG3Q16557 428 aa13.06□□□□□ -0.32
HDAC6-225ENST00000483506 GUK1Q16774 197 aa13.06□□□□□ -0.32
HDAC6-225ENST00000483506 GCSAMLQ5JQS6 135 aa13.06□□□□□ -0.32
HDAC6-225ENST00000483506 AMTNQ6UX39 209 aa13.06□□□□□ -0.32
HDAC6-225ENST00000483506 OR4B1Q8NGF8 309 aa13.06□□□□□ -0.32
HDAC6-225ENST00000483506 SAT2Q96F10 170 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-225ENST00000483506 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
HDAC6-225ENST00000483506 XCL2Q9UBD3 114 aa13.06□□□□□ -0.32
HDAC6-225ENST00000483506 C17orf112F2Z3M2 114 aa13.05□□□□□ -0.32
HDAC6-225ENST00000483506 H3BQ15 152 aa13.05□□□□□ -0.32
HDAC6-225ENST00000483506 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
HDAC6-225ENST00000483506 MIFP14174 115 aa13.05□□□□□ -0.32
HDAC6-225ENST00000483506 ZNF705AQ6ZN79 300 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-225ENST00000483506 AQP10Q96PS8 301 aa13.05□□□□□ -0.32
HDAC6-225ENST00000483506 SLC17A3O00476 420 aa13.04□□□□□ -0.32
HDAC6-225ENST00000483506 ZNF253O75346 499 aa13.04□□□□□ -0.32
HDAC6-225ENST00000483506 IFNA5P01569 189 aa13.04□□□□□ -0.32
HDAC6-225ENST00000483506 IGKV3-20P01619 116 aa13.04□□□□□ -0.32
HDAC6-225ENST00000483506 HLA-DMBP28068 263 aa13.04□□□□□ -0.32
HDAC6-225ENST00000483506 CNN1P51911 297 aaKnown RBP13.04□□□□□ -0.32
HDAC6-225ENST00000483506 ZNF738Q8NE65 137 aa13.04□□□□□ -0.32
HDAC6-225ENST00000483506 LRRC20Q8TCA0 184 aa13.04□□□□□ -0.32
HDAC6-225ENST00000483506 SMIM3Q9BZL3 60 aa13.04□□□□□ -0.32
HDAC6-225ENST00000483506 WFDC1Q9HC57 220 aa13.04□□□□□ -0.32
HDAC6-225ENST00000483506 ZNF705FA8MVS1 300 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-225ENST00000483506 ZNF705DP0CH99 300 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-225ENST00000483506 ZNF705BP0CI00 300 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-225ENST00000483506 OR8A1Q8NGG7 326 aa13.03□□□□□ -0.32
HDAC6-225ENST00000483506 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
HDAC6-225ENST00000483506 NEU1Q99519 415 aa13.03□□□□□ -0.32
HDAC6-225ENST00000483506 MRPL32Q9BYC8 188 aaKnown RBP13.03□□□□□ -0.32
HDAC6-225ENST00000483506 SLC35B3Q9H1N7 401 aa13.03□□□□□ -0.32
HDAC6-225ENST00000483506 ZNF586Q9NXT0 402 aa13.03□□□□□ -0.32
HDAC6-225ENST00000483506 IGHV4-28A0A0C4DH34 117 aa13.02□□□□□ -0.33
HDAC6-225ENST00000483506 PDE6HQ13956 83 aa13.02□□□□□ -0.33
HDAC6-225ENST00000483506 Q5BKY6 102 aa13.02□□□□□ -0.33
HDAC6-225ENST00000483506 SCGB1C1Q8TD33 95 aa13.02□□□□□ -0.33
HDAC6-225ENST00000483506 SLC25A2Q9BXI2 301 aa13.02□□□□□ -0.33
HDAC6-225ENST00000483506 MFFQ9GZY8 342 aa13.02□□□□□ -0.33
HDAC6-225ENST00000483506 TRBV19A0A075B6N1 114 aa13.01□□□□□ -0.33
HDAC6-225ENST00000483506 AMBPP02760 352 aa13.01□□□□□ -0.33
HDAC6-225ENST00000483506 SNRPCP09234 159 aaKnown RBP13.01□□□□□ -0.33
HDAC6-225ENST00000483506 RBMY1A1P0DJD3 496 aaKnown RBP13.01□□□□□ -0.33
HDAC6-225ENST00000483506 RBMY1CP0DJD4 496 aa13.01□□□□□ -0.33
HDAC6-225ENST00000483506 HIST1H1EP10412 219 aaKnown RBP13.01□□□□□ -0.33
HDAC6-225ENST00000483506 FXYD7P58549 80 aa13.01□□□□□ -0.33
HDAC6-225ENST00000483506 RBMY1FQ15415 496 aaKnown RBP13.01□□□□□ -0.33
HDAC6-225ENST00000483506 MIR17HGQ75NE6 70 aa13.01□□□□□ -0.33
HDAC6-225ENST00000483506 RPUSD4Q96CM3 377 aaKnown RBP13.01□□□□□ -0.33
HDAC6-225ENST00000483506 H3BTX0 84 aa13□□□□□ -0.33
HDAC6-225ENST00000483506 FUT9Q9Y231 359 aa13□□□□□ -0.33
HDAC6-225ENST00000483506 TIMM9Q9Y5J7 89 aa13□□□□□ -0.33
HDAC6-225ENST00000483506 PLECQ15149 4684 aaKnown RBP12.99□□□□□ -0.33
HDAC6-225ENST00000483506 SACSQ9NZJ4 4579 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 SMIM9A6NGZ8 99 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 G3V3Q6 166 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 DEFB4AO15263 64 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 NDUFB4O95168 129 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 PYYP10082 97 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 HIST1H1AQ02539 215 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-225ENST00000483506 ZNF266Q14584 549 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 FFAR4Q5NUL3 377 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 C11orf45Q8TAV5 145 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 MRPL53Q96EL3 112 aaKnown RBP12.99□□□□□ -0.33
HDAC6-225ENST00000483506 IGF2BP2-AS1Q96M15 143 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 RYR3Q15413 4870 aa12.99□□□□□ -0.33
HDAC6-225ENST00000483506 NUPR2A6NF83 97 aa12.98□□□□□ -0.33
HDAC6-225ENST00000483506 BOLA2-SMG1P6H3BVE0 249 aa12.98□□□□□ -0.33
HDAC6-225ENST00000483506 CRXO43186 299 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-225ENST00000483506 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
HDAC6-225ENST00000483506 OR2T35Q8NGX2 323 aa12.98□□□□□ -0.33
HDAC6-225ENST00000483506 TNFSF18Q9UNG2 199 aa12.98□□□□□ -0.33
HDAC6-225ENST00000483506 GOLT1BQ9Y3E0 138 aa12.98□□□□□ -0.33
HDAC6-225ENST00000483506 RNF222A6NCQ9 220 aa12.97□□□□□ -0.33
HDAC6-225ENST00000483506 CXorf65A6NEN9 183 aa12.97□□□□□ -0.33
HDAC6-225ENST00000483506 PMS2P11Q13670 270 aa12.97□□□□□ -0.33
HDAC6-225ENST00000483506 FXYD5Q96DB9 178 aa12.97□□□□□ -0.33
HDAC6-225ENST00000483506 OR51M1Q9H341 326 aa12.97□□□□□ -0.33
HDAC6-225ENST00000483506 PRELID1Q9Y255 219 aa12.97□□□□□ -0.33
HDAC6-225ENST00000483506 ALMS1Q8TCU4 4167 aa12.96□□□□□ -0.33
HDAC6-225ENST00000483506 PRAC2D3DTV9 90 aa12.96□□□□□ -0.33
HDAC6-225ENST00000483506 M0R2Z0 102 aa12.96□□□□□ -0.33
HDAC6-225ENST00000483506 NANOS2P60321 138 aaKnown RBP12.96□□□□□ -0.33
HDAC6-225ENST00000483506 RHOBP62745 196 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms