RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 TMEM177Q53S58 311 aa9.95□□□□□ -0.82
CCDC78-213ENST00000482878 PRR30Q53SZ7 412 aaPredicted RBP9.95□□□□□ -0.82
CCDC78-213ENST00000482878 ZNF833PQ6ZTB9 187 aa9.95□□□□□ -0.82
CCDC78-213ENST00000482878 ATP5L2Q7Z4Y8 100 aa9.95□□□□□ -0.82
CCDC78-213ENST00000482878 MRAP2Q96G30 205 aa9.95□□□□□ -0.82
CCDC78-213ENST00000482878 DLL1O00548 723 aa9.95□□□□□ -0.82
CCDC78-213ENST00000482878 SMAD7O15105 426 aaKnown RBP9.95□□□□□ -0.82
CCDC78-213ENST00000482878 ENSAO43768 121 aaKnown RBP9.95□□□□□ -0.82
CCDC78-213ENST00000482878 C10orf55Q5SWW7 151 aa9.95□□□□□ -0.82
CCDC78-213ENST00000482878 PATE2Q6UY27 113 aa9.95□□□□□ -0.82
CCDC78-213ENST00000482878 CACNG8Q8WXS5 425 aa9.95□□□□□ -0.82
CCDC78-213ENST00000482878 ARPC1AQ92747 370 aa9.95□□□□□ -0.82
CCDC78-213ENST00000482878 TM4SF5O14894 197 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 FXYD7P58549 80 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 ZNF329Q86UD4 541 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 ZNF714Q96N38 554 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 COL25A1Q9BXS0 654 aaPredicted RBP9.94□□□□□ -0.82
CCDC78-213ENST00000482878 CCL3L1P16619 93 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 CACNG7P62955 275 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 ERHP84090 104 aaKnown RBP9.94□□□□□ -0.82
CCDC78-213ENST00000482878 WT1-ASQ06250 92 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 NPIPB3Q92617 1050 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 PAXXQ9BUH6 204 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 MRPL36Q9P0J6 103 aaKnown RBP9.94□□□□□ -0.82
CCDC78-213ENST00000482878 SS18L2Q9UHA2 77 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 FAM215AQ9Y5M1 114 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 TLN2Q9Y4G6 2542 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 CGB1A6NKQ9 187 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 COX7A2P2O60397 106 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 DIAPH2-AS1Q14236 149 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 PCP2Q8IVA1 136 aa9.94□□□□□ -0.82
CCDC78-213ENST00000482878 OSR1Q8TAX0 266 aaPredicted RBP9.94□□□□□ -0.82
CCDC78-213ENST00000482878 RPP21Q9H633 154 aaKnown RBP9.94□□□□□ -0.82
CCDC78-213ENST00000482878 DOPEY2Q9Y3R5 2298 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 A0A1W2PRD5 423 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 A0A1W2PRF3 423 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 A0A1W2PRM7 423 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 hADV38S2A0JD32 116 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 DLX1P56177 255 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 C10orf113Q5VZT2 155 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 OR4X2Q8NGF9 303 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
CCDC78-213ENST00000482878 IGKV1D-37A0A075B6S9 117 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 K7EMI3 77 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 FAM231DQ6ZW35 169 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 VGLL1Q99990 258 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 LINC00312Q9Y6C7 94 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 DSCAML1Q8TD84 2053 aa9.93□□□□□ -0.82
CCDC78-213ENST00000482878 FSTL3O95633 263 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 WFDC3Q8IUB2 231 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 BCL6BQ8N143 479 aaPredicted RBP9.92□□□□□ -0.82
CCDC78-213ENST00000482878 OR9G4Q8NGQ1 327 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 FXYD5Q96DB9 178 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 ZNF747Q9BV97 191 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 SCNM1Q9BWG6 230 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 IGHV3-72A0A0B4J1Y9 119 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 SLC25A17O43808 307 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 FCN3O75636 299 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 OR5AN1Q8NGI8 311 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 FLYWCH2Q96CP2 140 aaKnown RBP9.92□□□□□ -0.82
CCDC78-213ENST00000482878 USP9YO00507 2555 aaPredicted RBP9.92□□□□□ -0.82
CCDC78-213ENST00000482878 A0A1B0GXF2 115 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 DYSFO75923 2080 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 TEX36Q5VZQ5 186 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 RUSC1-AS1Q66K80 236 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 SPAG8Q99932 426 aaPredicted RBP9.92□□□□□ -0.82
CCDC78-213ENST00000482878 SETD2Q9BYW2 2564 aaPredicted RBP9.92□□□□□ -0.82
CCDC78-213ENST00000482878 HIVEP3Q5T1R4 2406 aa9.92□□□□□ -0.82
CCDC78-213ENST00000482878 TCRBV4S1A1TA0A5B7 111 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 LYNX1G3V0Z9 82 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 H3BTX0 84 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 LYNX1P0DP58 116 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 NAV3Q8IVL0 2385 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 FGF6P10767 208 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 TMEM30BQ3MIR4 351 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 AMTNQ6UX39 209 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 C7orf69Q9H7B7 122 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 RAI1Q7Z5J4 1906 aaPredicted RBP9.91□□□□□ -0.82
CCDC78-213ENST00000482878 H3BMG7 143 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 FCER1GP30273 86 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 LINC00305Q7Z4B0 112 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 OR1L4Q8NGR5 311 aa9.91□□□□□ -0.82
CCDC78-213ENST00000482878 NOTCH2Q04721 2471 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 INS-IGF2F8WCM5 200 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 COL8A1P27658 744 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 FXYD2P54710 66 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 TMEM200BQ69YZ2 307 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 RBPMS2Q6ZRY4 209 aaKnown RBP9.9□□□□□ -0.82
CCDC78-213ENST00000482878 BOD1L2Q8IYS8 172 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 TMEM167AQ8TBQ9 72 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 POLQO75417 2590 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 PTPN13Q12923 2485 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 PGPA6NDG6 321 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 CD40P25942 277 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 MYCNOSP40205 109 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 C3orf36Q3SXR2 165 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 GTSF1Q8WW33 167 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 TPSG1Q9NRR2 321 aa9.9□□□□□ -0.82
CCDC78-213ENST00000482878 SPANXB1Q9NS25 103 aaPredicted RBP9.9□□□□□ -0.82
CCDC78-213ENST00000482878 INSIG2Q9Y5U4 225 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms