RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 THYN1Q9P016 225 aa11.4□□□□□ -0.58
COL9A2-207ENST00000482722 PPIAL4GP0DN37 164 aa11.4□□□□□ -0.58
COL9A2-207ENST00000482722 PLP1P60201 277 aa11.4□□□□□ -0.58
COL9A2-207ENST00000482722 CIARTQ8N365 385 aaPredicted RBP11.4□□□□□ -0.58
COL9A2-207ENST00000482722 FAM57AQ8TBR7 257 aa11.4□□□□□ -0.58
COL9A2-207ENST00000482722 CCL17Q92583 94 aa11.4□□□□□ -0.58
COL9A2-207ENST00000482722 FMC1Q96HJ9 113 aa11.4□□□□□ -0.58
COL9A2-207ENST00000482722 UTP20O75691 2785 aaKnown RBP11.39□□□□□ -0.59
COL9A2-207ENST00000482722 A0A1W2PPM0 123 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 COL8A1P27658 744 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 GATA4P43694 442 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 FA2HQ7L5A8 372 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 BOD1L2Q8IYS8 172 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 PKD1L2Q7Z442 2459 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 A1L4Q6 167 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 OVOL3O00110 214 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 TCRAP04437 139 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 CSN1S1P47710 185 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 NHLH1Q02575 133 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 MEF2CQ06413 473 aaPredicted RBP11.39□□□□□ -0.59
COL9A2-207ENST00000482722 HSD52Q0P140 79 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 OR10X1Q8NGY0 326 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 PRSS3P2Q8NHM4 247 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 PERPQ96FX8 193 aa11.39□□□□□ -0.59
COL9A2-207ENST00000482722 CGB1A6NKQ9 187 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 LOXL1Q08397 574 aaPredicted RBP11.38□□□□□ -0.59
COL9A2-207ENST00000482722 PRSS57Q6UWY2 283 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 TPSG1Q9NRR2 321 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 ACACBO00763 2458 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 IGHV3-72A0A0B4J1Y9 119 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 NPIPB6E9PJ23 425 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 SMAD7O15105 426 aaKnown RBP11.38□□□□□ -0.59
COL9A2-207ENST00000482722 ARMS2P0C7Q2 107 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 APOBEC3AP31941 199 aaPredicted RBP11.38□□□□□ -0.59
COL9A2-207ENST00000482722 CENPEQ02224 2701 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 A0A096LNJ9 63 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 PRRG2O14669 202 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 RPL24P83731 157 aaKnown RBP11.38□□□□□ -0.59
COL9A2-207ENST00000482722 ADAMTSL5Q6ZMM2 481 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 TNFRSF14Q92956 283 aa11.38□□□□□ -0.59
COL9A2-207ENST00000482722 FLYWCH2Q96CP2 140 aaKnown RBP11.38□□□□□ -0.59
COL9A2-207ENST00000482722 C22orf46C9J442 243 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 OR5AN1Q8NGI8 311 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 DPF1Q92782 380 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 Q9H3A6 140 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 MALRD1Q5VYJ5 2156 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 CFAP46Q8IYW2 2715 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 ENSAO43768 121 aaKnown RBP11.37□□□□□ -0.59
COL9A2-207ENST00000482722 IFI27P40305 119 aaPredicted RBP11.37□□□□□ -0.59
COL9A2-207ENST00000482722 THAP8Q8NA92 274 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 STXBP6Q8NFX7 210 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 RITA1Q96K30 269 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 INSIG2Q9Y5U4 225 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 LINC00312Q9Y6C7 94 aa11.37□□□□□ -0.59
COL9A2-207ENST00000482722 CACNA1BQ00975 2339 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 A0A1B0GUT8 65 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 TEX48A0A1B0GUV7 120 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 TM4SF20Q53R12 229 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 TMEM200BQ69YZ2 307 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 LYPD2Q6UXB3 125 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 Q86TA4 180 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 FLNCQ14315 2725 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 SLC25A17O43808 307 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 FXYD7P58549 80 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 CACNG7P62955 275 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 PCP2Q8IVA1 136 aa11.36□□□□□ -0.59
COL9A2-207ENST00000482722 PPIAL4CA0A0B4J2A2 164 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 SMIM17P0DL12 118 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 AZU1P20160 251 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 TMEM108Q6UXF1 575 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 PRNTQ86SH4 94 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 OR9G4Q8NGQ1 327 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
COL9A2-207ENST00000482722 TPPP3Q9BW30 176 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 F11RQ9Y624 299 aaKnown RBP11.35□□□□□ -0.59
COL9A2-207ENST00000482722 FCN3O75636 299 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 GP9P14770 177 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 TNFRSF1AP19438 455 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 GRNP28799 593 aaKnown RBP11.35□□□□□ -0.59
COL9A2-207ENST00000482722 ZNF833PQ6ZTB9 187 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 S100A7AQ86SG5 101 aa11.35□□□□□ -0.59
COL9A2-207ENST00000482722 SRSF12Q8WXF0 261 aaKnown RBP11.35□□□□□ -0.59
COL9A2-207ENST00000482722 FABP2P12104 132 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 BSPH1Q075Z2 132 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 EXOC3-AS1Q8N2X6 119 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 CSMD2Q7Z408 3487 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 A0A1W2PPI3 338 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 C17orf100A8MU93 164 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 K7ENP7 123 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 NMUP48645 174 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 SMAGPQ0VAQ4 97 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 ADIPOQQ15848 244 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 OR4X2Q8NGF9 303 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 CACNA1AO00555 2505 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 LGALS9BQ3B8N2 356 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms