RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
IFT88-206ENST00000482172 TEP1Q99973 2627 aaKnown RBP9.47□□□□□ -0.89
IFT88-206ENST00000482172 PF4P02776 101 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 UBE2G2P60604 165 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 MEF2BQ02080 365 aaPredicted RBP9.47□□□□□ -0.89
IFT88-206ENST00000482172 SAMD13Q5VXD3 122 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 C12orf54Q6X4T0 127 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 ADAMTSL5Q6ZMM2 481 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 CCDC28AQ8IWP9 274 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 SLC7A5P1Q8MH63 180 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 BLNKQ8WV28 456 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 C17orf77Q96MU5 243 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 TCEAL7Q9BRU2 100 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 SLC50A1Q9BRV3 221 aa9.47□□□□□ -0.89
IFT88-206ENST00000482172 C11orf94C9JXX5 98 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 PDE6DO43924 150 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 NDUFB4O95168 129 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 EDN2P20800 178 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 RANP62826 216 aaKnown RBP9.46□□□□□ -0.9
IFT88-206ENST00000482172 CST9LP1Q5W188 147 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 TCF24Q7RTU0 167 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 ARL6IP6Q8N6S5 226 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 C3orf56Q8N813 242 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 LINC00482Q8N8I6 264 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 RXFP4Q8TDU9 374 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 OTORQ9NRC9 128 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 CLEC5AQ9NY25 188 aa9.46□□□□□ -0.9
IFT88-206ENST00000482172 JMJD1CQ15652 2540 aa9.45□□□□□ -0.9
IFT88-206ENST00000482172 F6UZH7 168 aa9.45□□□□□ -0.9
IFT88-206ENST00000482172 TMEM250H0YL14 139 aa9.45□□□□□ -0.9
IFT88-206ENST00000482172 CD81P60033 236 aa9.45□□□□□ -0.9
IFT88-206ENST00000482172 SUMO1P63165 101 aaKnown RBP9.45□□□□□ -0.9
IFT88-206ENST00000482172 SRSF3P84103 164 aaKnown RBP9.45□□□□□ -0.9
IFT88-206ENST00000482172 Q9H3A6 140 aa9.45□□□□□ -0.9
IFT88-206ENST00000482172 AAMDCQ9H7C9 122 aa9.45□□□□□ -0.9
IFT88-206ENST00000482172 TREM1Q9NP99 234 aa9.45□□□□□ -0.9
IFT88-206ENST00000482172 NRN1Q9NPD7 142 aa9.45□□□□□ -0.9
IFT88-206ENST00000482172 ZNF331Q9NQX6 463 aaPredicted RBP9.45□□□□□ -0.9
IFT88-206ENST00000482172 MLXQ9UH92 298 aa9.45□□□□□ -0.9
IFT88-206ENST00000482172 TRAV2A0A0B4J234 112 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 TRAV25A0A0B4J276 109 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 PGPA6NDG6 321 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 GGTLC3B5MD39 225 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
IFT88-206ENST00000482172 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
IFT88-206ENST00000482172 ATP5G3P48201 142 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 DEFB114Q30KQ6 69 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 LURAP1LQ8IV03 231 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 C5orf17Q8NAS9 161 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 DYNLRB2Q8TF09 96 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 SLC35B3Q9H1N7 401 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 PRELID1Q9Y255 219 aa9.44□□□□□ -0.9
IFT88-206ENST00000482172 C9JQL5 133 aa9.43□□□□□ -0.9
IFT88-206ENST00000482172 H3BTX0 84 aa9.43□□□□□ -0.9
IFT88-206ENST00000482172 SLC17A3O00476 420 aa9.43□□□□□ -0.9
IFT88-206ENST00000482172 SOCS3O14543 225 aa9.43□□□□□ -0.9
IFT88-206ENST00000482172 RPL11P62913 178 aaKnown RBP9.43□□□□□ -0.9
IFT88-206ENST00000482172 OR2K2Q8NGT1 345 aa9.43□□□□□ -0.9
IFT88-206ENST00000482172 HIST1H2BAQ96A08 127 aa9.43□□□□□ -0.9
IFT88-206ENST00000482172 C11orf52Q96A22 123 aa9.43□□□□□ -0.9
IFT88-206ENST00000482172 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
IFT88-206ENST00000482172 CITED4Q96RK1 184 aa9.43□□□□□ -0.9
IFT88-206ENST00000482172 NIPBLQ6KC79 2804 aaeCLIP9.43□□□□□ -0.9
IFT88-206ENST00000482172 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 ISLRO14498 428 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 TSPAN4O14817 238 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 SLC25A5P05141 298 aaKnown RBP9.42□□□□□ -0.9
IFT88-206ENST00000482172 PAFAH1B2P68402 229 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 EXOC3-AS1Q8N2X6 119 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 CMTM2Q8TAZ6 248 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 DCANP1Q8TF63 244 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 RPUSD4Q96CM3 377 aaKnown RBP9.42□□□□□ -0.9
IFT88-206ENST00000482172 C16orf92Q96LL3 132 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 MS4A6AQ9H2W1 248 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 EPDR1Q9UM22 224 aa9.42□□□□□ -0.9
IFT88-206ENST00000482172 TRAV8-2A0A0B4J237 113 aa9.41□□□□□ -0.9
IFT88-206ENST00000482172 SERTM2A0A1B0GWG4 89 aa9.41□□□□□ -0.9
IFT88-206ENST00000482172 SFTA3P0C7M3 94 aa9.41□□□□□ -0.9
IFT88-206ENST00000482172 ID1P41134 155 aa9.41□□□□□ -0.9
IFT88-206ENST00000482172 CSN1S1P47710 185 aa9.41□□□□□ -0.9
IFT88-206ENST00000482172 INSL3P51460 131 aa9.41□□□□□ -0.9
IFT88-206ENST00000482172 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
IFT88-206ENST00000482172 WFDC9Q8NEX5 89 aa9.41□□□□□ -0.9
IFT88-206ENST00000482172 SPAG8Q99932 426 aaPredicted RBP9.41□□□□□ -0.9
IFT88-206ENST00000482172 MCRIP2Q9BUT9 160 aaKnown RBP9.41□□□□□ -0.9
IFT88-206ENST00000482172 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 KRBOX1C9JBD0 128 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 K7EQG2 157 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 DNASE2O00115 360 aaPredicted RBP9.4□□□□□ -0.9
IFT88-206ENST00000482172 SAP30O75446 220 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 IGLV1-51P01701 117 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 TCRAP04437 139 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 PSG3Q16557 428 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 CD300EQ496F6 205 aaPredicted RBP9.4□□□□□ -0.9
IFT88-206ENST00000482172 FAM74A3Q4VXF1 159 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 TMEM61Q8N0U2 210 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 CYB561D1Q8N8Q1 229 aa9.4□□□□□ -0.9
IFT88-206ENST00000482172 ATG101Q9BSB4 218 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms