RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 LRRC20Q8TCA0 184 aa12.36□□□□□ -0.43
NUP58-212ENST00000481980 HERC2O95714 4834 aa12.36□□□□□ -0.43
NUP58-212ENST00000481980 IGHV3OR16-8A0A075B7F1 116 aa12.35□□□□□ -0.43
NUP58-212ENST00000481980 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
NUP58-212ENST00000481980 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
NUP58-212ENST00000481980 RAB14P61106 215 aa12.35□□□□□ -0.43
NUP58-212ENST00000481980 FAM122CQ6P4D5 195 aa12.35□□□□□ -0.43
NUP58-212ENST00000481980 LINC00305Q7Z4B0 112 aa12.35□□□□□ -0.43
NUP58-212ENST00000481980 RNF141Q8WVD5 230 aa12.35□□□□□ -0.43
NUP58-212ENST00000481980 ZFAND3Q9H8U3 227 aa12.35□□□□□ -0.43
NUP58-212ENST00000481980 MAP6D1Q9H9H5 199 aa12.35□□□□□ -0.43
NUP58-212ENST00000481980 ZNF207O43670 478 aaKnown RBP12.34□□□□□ -0.43
NUP58-212ENST00000481980 USF2Q15853 346 aaPredicted RBP12.34□□□□□ -0.43
NUP58-212ENST00000481980 KHDC3LQ587J8 217 aa12.34□□□□□ -0.43
NUP58-212ENST00000481980 TEX261Q6UWH6 196 aa12.34□□□□□ -0.43
NUP58-212ENST00000481980 RPP25LQ8N5L8 163 aaKnown RBP12.34□□□□□ -0.43
NUP58-212ENST00000481980 FAM213BQ8TBF2 198 aa12.34□□□□□ -0.43
NUP58-212ENST00000481980 PHLDA1Q8WV24 401 aaPredicted RBP12.34□□□□□ -0.43
NUP58-212ENST00000481980 KRTAP17-1Q9BYP8 105 aa12.34□□□□□ -0.43
NUP58-212ENST00000481980 VPS13DQ5THJ4 4388 aa12.34□□□□□ -0.43
NUP58-212ENST00000481980 SULT1A2P50226 295 aa12.33□□□□□ -0.44
NUP58-212ENST00000481980 ZNF767PQ75MW2 155 aa12.33□□□□□ -0.44
NUP58-212ENST00000481980 STXBP6Q8NFX7 210 aa12.33□□□□□ -0.44
NUP58-212ENST00000481980 GPR82Q96P67 336 aa12.33□□□□□ -0.44
NUP58-212ENST00000481980 SLC25A22Q9H936 323 aa12.33□□□□□ -0.44
NUP58-212ENST00000481980 SMPXQ9UHP9 88 aa12.33□□□□□ -0.44
NUP58-212ENST00000481980 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
NUP58-212ENST00000481980 IGHV7-4-1A0A0J9YVY3 117 aa12.32□□□□□ -0.44
NUP58-212ENST00000481980 CTXND1A0A1B0GTU2 59 aa12.32□□□□□ -0.44
NUP58-212ENST00000481980 ZNF705EA8MWA4 302 aaPredicted RBP12.32□□□□□ -0.44
NUP58-212ENST00000481980 CD5P06127 495 aa12.32□□□□□ -0.44
NUP58-212ENST00000481980 LGALS9CQ6DKI2 356 aa12.32□□□□□ -0.44
NUP58-212ENST00000481980 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
NUP58-212ENST00000481980 IQCF2Q8IXL9 164 aa12.32□□□□□ -0.44
NUP58-212ENST00000481980 OR8I2Q8N0Y5 310 aa12.32□□□□□ -0.44
NUP58-212ENST00000481980 UHRF2Q96PU4 802 aa12.32□□□□□ -0.44
NUP58-212ENST00000481980 SHANK2-AS3Q9BTD1 123 aa12.32□□□□□ -0.44
NUP58-212ENST00000481980 SLC25A39Q9BZJ4 359 aaPredicted RBP12.32□□□□□ -0.44
NUP58-212ENST00000481980 HELTA6NFD8 242 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 H3BRN7 92 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 OR7C2O60412 319 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 HBE1P02100 147 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 RPL7P18124 248 aaKnown RBP12.31□□□□□ -0.44
NUP58-212ENST00000481980 CRYBB3P26998 211 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 GALR1P47211 349 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 CMC4P56277 68 aaPredicted RBP12.31□□□□□ -0.44
NUP58-212ENST00000481980 BLOC1S1P78537 153 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 GCSAMLQ5JQS6 135 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 C1orf194Q5T5A4 169 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 BPIFA4PQ86YQ2 179 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 ZNF680Q8NEM1 530 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 CSTL1Q9H114 145 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 RPRMQ9NS64 109 aa12.31□□□□□ -0.44
NUP58-212ENST00000481980 CHEK1O14757 476 aa12.3□□□□□ -0.44
NUP58-212ENST00000481980 H2AFB1P0C5Y9 115 aa12.3□□□□□ -0.44
NUP58-212ENST00000481980 RPL11P62913 178 aaKnown RBP12.3□□□□□ -0.44
NUP58-212ENST00000481980 FAM74A1Q5RGS3 127 aa12.3□□□□□ -0.44
NUP58-212ENST00000481980 PQLC2Q6ZP29 291 aa12.3□□□□□ -0.44
NUP58-212ENST00000481980 TMEM37Q8WXS4 190 aa12.3□□□□□ -0.44
NUP58-212ENST00000481980 ZNF414Q96IQ9 312 aa12.3□□□□□ -0.44
NUP58-212ENST00000481980 RHPN1-AS1Q9BWJ2 59 aa12.3□□□□□ -0.44
NUP58-212ENST00000481980 SCRT1Q9BWW7 348 aa12.3□□□□□ -0.44
NUP58-212ENST00000481980 IGHV3-49A0A0A0MS15 119 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 MAP1LC3B2A6NCE7 125 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 ZNF98A6NK75 572 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 CXorf1O96002 111 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 ZNF124Q15973 351 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 RAB24Q969Q5 203 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 RARRES2Q99969 163 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 MAP1LC3BQ9GZQ8 125 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 VSIRQ9H7M9 311 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 RFNGQ9Y644 331 aa12.29□□□□□ -0.44
NUP58-212ENST00000481980 IGHV3-66A0A0C4DH42 116 aa12.28□□□□□ -0.44
NUP58-212ENST00000481980 TFPI2P48307 235 aa12.28□□□□□ -0.44
NUP58-212ENST00000481980 MEOX2P50222 304 aa12.28□□□□□ -0.44
NUP58-212ENST00000481980 UBE2L3P68036 154 aaKnown RBP12.28□□□□□ -0.44
NUP58-212ENST00000481980 MIR17HGQ75NE6 70 aa12.28□□□□□ -0.44
NUP58-212ENST00000481980 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
NUP58-212ENST00000481980 SAT2Q96F10 170 aaPredicted RBP12.28□□□□□ -0.44
NUP58-212ENST00000481980 SEPSECSQ9HD40 501 aaKnown RBP12.28□□□□□ -0.44
NUP58-212ENST00000481980 IGHV3OR16-13A0A075B7E8 117 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 IGHV3-74A0A0B4J1X5 117 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 BUB3O43684 328 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 NANOS2P60321 138 aaKnown RBP12.27□□□□□ -0.45
NUP58-212ENST00000481980 PAFAH1B2P68402 229 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 SAMD13Q5VXD3 122 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 FAM90A2PQ658T7 463 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 LCN15Q6UWW0 184 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 PATE2Q6UY27 113 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 SIGLEC15Q6ZMC9 328 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 C11orf45Q8TAV5 145 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 PAXXQ9BUH6 204 aa12.27□□□□□ -0.45
NUP58-212ENST00000481980 IGKV3-7A0A075B6H7 116 aa12.26□□□□□ -0.45
NUP58-212ENST00000481980 IFNA1P01562 189 aa12.26□□□□□ -0.45
NUP58-212ENST00000481980 PPT1P50897 306 aa12.26□□□□□ -0.45
NUP58-212ENST00000481980 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
NUP58-212ENST00000481980 OR11H2Q8NH07 326 aa12.26□□□□□ -0.45
NUP58-212ENST00000481980 OR51M1Q9H341 326 aa12.26□□□□□ -0.45
NUP58-212ENST00000481980 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
NUP58-212ENST00000481980 TMEM167BQ9NRX6 74 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms