RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 STXBP6Q8NFX7 210 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 MUC7Q8TAX7 377 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 PFDN5Q99471 154 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 SEC22CQ9BRL7 303 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 OVOL2Q9BRP0 275 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 SHANK2-AS3Q9BTD1 123 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 SLC25A31Q9H0C2 315 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 UQCC1Q9NVA1 299 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 WDR83OSQ9Y284 106 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 HLA-DRB4X5D2U9 266 aa3.59□□□□□ -1.83
PTCD3-213ENST00000480102 TRAV6A0A075B6T7 132 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 TRBV7-9A0A0J9YWB2 115 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 TEX48A0A1B0GUV7 120 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 SMIM9A6NGZ8 99 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF98A6NK75 572 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 H3BRN7 92 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 L7N2F9 121 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 MRPS12O15235 138 aaKnown RBP3.58□□□□□ -1.84
PTCD3-213ENST00000480102 HYPMO75409 117 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 IGHV3-48P01763 117 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 APOHP02749 345 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-213ENST00000480102 MIFP14174 115 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 EDN2P20800 178 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 AKR1C1Q04828 323 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 FGL1Q08830 312 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 C11orf87Q6NUJ2 197 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 Q6ZRG5 221 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 HAPLN4Q86UW8 402 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 CSNK1G2-AS1Q8NCQ2 148 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 OR1L4Q8NGR5 311 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 MRPL53Q96EL3 112 aaKnown RBP3.58□□□□□ -1.84
PTCD3-213ENST00000480102 ODF3Q96PU9 254 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 TMEM147Q9BVK8 224 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 SLC25A39Q9BZJ4 359 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-213ENST00000480102 MAGT1Q9H0U3 335 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 TMEM14CQ9P0S9 112 aa3.58□□□□□ -1.84
PTCD3-213ENST00000480102 LINC00854A0A1B0GVQ3 168 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 TMEM189A5PLL7 270 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 C5orf51A6NDU8 294 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 H3BMM0 161 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 GOSR2O14653 212 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 AGPAT2O15120 278 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 DUSP14O95147 198 aaKnown RBP3.57□□□□□ -1.84
PTCD3-213ENST00000480102 NMBP08949 121 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 GIG44P09565 113 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-213ENST00000480102 GIPP09681 153 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-213ENST00000480102 METTL15P1P0C7V9 234 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 LINC00869P0C866 280 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 IAPPP10997 89 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 TSPOP30536 169 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 CAMLGP49069 296 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 CAV2P51636 162 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 H2BFSP57053 126 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 DEFB131AP59861 70 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 SLC38A11Q08AI6 406 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 ARL16Q0P5N6 197 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 OPCMLQ14982 345 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 OXA1LQ15070 435 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 CASC10Q5T4H9 136 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 LCN15Q6UWW0 184 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF705AQ6ZN79 300 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-213ENST00000480102 BPIFA4PQ86YQ2 179 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 STHQ8IWL8 128 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 OR8I2Q8N0Y5 310 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 PPP1R1CQ8WVI7 109 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 DAZAP1Q96EP5 407 aaKnown RBP3.57□□□□□ -1.84
PTCD3-213ENST00000480102 C17orf77Q96MU5 243 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 C20orf144Q9BQM9 153 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 SLC50A1Q9BRV3 221 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 RNF126Q9BV68 326 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 CTDSP1Q9GZU7 261 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 MFFQ9GZY8 342 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 SAV1Q9H4B6 383 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-213ENST00000480102 DNAJC4Q9NNZ3 241 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 RPRMQ9NS64 109 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 PPP1R14DQ9NXH3 145 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 GSKIPQ9P0R6 139 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 HIGD1AQ9Y241 93 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 PXMP4Q9Y6I8 212 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 DNAH7Q8WXX0 4024 aa3.57□□□□□ -1.84
PTCD3-213ENST00000480102 NUPR2A6NF83 97 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF705FA8MVS1 300 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-213ENST00000480102 H3BP45 60 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 PRYO14603 147 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 MPC2O95563 127 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF705DP0CH99 300 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF705BP0CI00 300 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-213ENST00000480102 IGLC2P0DOY2 106 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 LYZP61626 148 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 EWSR1Q01844 656 aaKnown RBP eCLIP3.56□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF674Q2M3X9 581 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 TMEM182Q6ZP80 229 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-213ENST00000480102 LYPD1Q8N2G4 141 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 TMEM37Q8WXS4 190 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 SAT2Q96F10 170 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-213ENST00000480102 FAM210BQ96KR6 192 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 AQP10Q96PS8 301 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 MGST2Q99735 147 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 NPCDR1Q9BY65 106 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 MRPL32Q9BYC8 188 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms