RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 S1PR3Q99500 378 aa8.72□□□□□ -1.01
CHD6-208ENST00000480022 ANAPC13Q9BS18 74 aa8.72□□□□□ -1.01
CHD6-208ENST00000480022 CHAC1Q9BUX1 264 aa8.72□□□□□ -1.01
CHD6-208ENST00000480022 PRO0461Q9UI25 63 aa8.72□□□□□ -1.01
CHD6-208ENST00000480022 APOMO95445 188 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 EPDR1Q9UM22 224 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 FOXA2Q9Y261 457 aaPredicted RBP8.71□□□□□ -1.02
CHD6-208ENST00000480022 FAM215AQ9Y5M1 114 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 ZFYVE26Q68DK2 2539 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 SPTA1P02549 2419 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 A0A1B0GWB2 263 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 MOSP00540 346 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 SLC25A5P05141 298 aaKnown RBP8.71□□□□□ -1.02
CHD6-208ENST00000480022 OR5AN1Q8NGI8 311 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 OR9G1Q8NH87 305 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 COQ2Q96H96 371 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 ASCL2Q99929 193 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 KLF12Q9Y4X4 402 aa8.71□□□□□ -1.02
CHD6-208ENST00000480022 ZNF503-AS2A6NEH8 195 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 FOXI1Q12951 378 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 AMTNQ6UX39 209 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 Q6ZUT4 128 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 SEM1Q6ZVN7 128 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 CEND1Q8N111 149 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 RNF152Q8N8N0 203 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 TM2D2Q9BX73 214 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 TMEM14BQ9NUH8 114 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 LTAP01374 205 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 FAM106CPP0CH98 169 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 IFI27P40305 119 aaPredicted RBP8.7□□□□□ -1.02
CHD6-208ENST00000480022 LOXL1Q08397 574 aaPredicted RBP8.7□□□□□ -1.02
CHD6-208ENST00000480022 FAM106AQ4KMX7 169 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 C9orf106Q8NAJ2 232 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 OR13A1Q8NGR1 328 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 ITLN1Q8WWA0 313 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 RAX2Q96IS3 184 aa8.7□□□□□ -1.02
CHD6-208ENST00000480022 CFAP46Q8IYW2 2715 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 SPINT2O43291 252 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 COX7A2P2O60397 106 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 MRPL33O75394 65 aaKnown RBP8.69□□□□□ -1.02
CHD6-208ENST00000480022 MYCNOSP40205 109 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 KIR2DS2P43631 304 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 PLP2Q04941 152 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 PIFOQ8TCI5 191 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 DDB2Q92466 427 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 IGHV3-64DA0A0J9YX35 117 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 MBD3L4A6NDZ8 208 aaPredicted RBP8.69□□□□□ -1.02
CHD6-208ENST00000480022 MBD3L3A6NE82 208 aaPredicted RBP8.69□□□□□ -1.02
CHD6-208ENST00000480022 MBD3L5A6NJ08 208 aaPredicted RBP8.69□□□□□ -1.02
CHD6-208ENST00000480022 B5MCH6 92 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 PSMG4Q5JS54 123 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 LCNL1Q6ZST4 164 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 MBD3L2Q8NHZ7 208 aaPredicted RBP8.69□□□□□ -1.02
CHD6-208ENST00000480022 FXYD5Q96DB9 178 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 ZNF714Q96N38 554 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 C1QTNF4Q9BXJ3 329 aa8.69□□□□□ -1.02
CHD6-208ENST00000480022 A0A1B0GUT8 65 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 GNLYP22749 145 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 XGP55808 180 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 RPL39P5Q59GN2 51 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 PDPNQ86YL7 162 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 ATP6V0E2Q8NHE4 81 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 RELNP78509 3460 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 IGKV3D-15A0A087WSY6 115 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 TNFRSF13BO14836 293 aaPredicted RBP8.68□□□□□ -1.02
CHD6-208ENST00000480022 MYOD1P15172 320 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 COL8A1P27658 744 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 MFAP4P55083 255 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 RIGQ13278 110 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 C10orf113Q5VZT2 155 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 OR10X1Q8NGY0 326 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 OSR1Q8TAX0 266 aaPredicted RBP8.68□□□□□ -1.02
CHD6-208ENST00000480022 FMC1Q96HJ9 113 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 DUX5Q96PT3 197 aa8.68□□□□□ -1.02
CHD6-208ENST00000480022 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.67□□□□□ -1.02
CHD6-208ENST00000480022 PGPA6NDG6 321 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 HBDP02042 147 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 MLANAQ16655 118 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 SLC25A48Q6ZT89 311 aaKnown RBP8.67□□□□□ -1.02
CHD6-208ENST00000480022 OR1L4Q8NGR5 311 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 VKORC1Q9BQB6 163 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 GNG12Q9UBI6 72 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 UFC1Q9Y3C8 167 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 FREM1Q5H8C1 2179 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 TANC2Q9HCD6 1990 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 LOC389332A0A1B0GUA5 103 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 GRPP07492 148 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 FOXG1P55316 489 aaPredicted RBP8.67□□□□□ -1.02
CHD6-208ENST00000480022 DNAJC13O75165 2243 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 TRBV25-1A0A075B6N4 114 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 IGKV2D-26A0A0A0MRZ7 120 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 C16orf97H3BN30 126 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.02
CHD6-208ENST00000480022 C12orf74Q32Q52 190 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 GATD1Q8NB37 220 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 IFI27L2Q9H2X8 130 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 DKK2Q9UBU2 259 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 PRNDQ9UKY0 176 aa8.67□□□□□ -1.02
CHD6-208ENST00000480022 C15orf65H3BRN8 121 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms