RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 MRPL27Q9P0M9 148 aaKnown RBP4.73□□□□□ -1.65
CPS1-207ENST00000479988 TRAV3A0A0B4J244 114 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 ZNF439Q8NDP4 499 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 CFHR4Q92496 578 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 OSTCQ9NRP0 149 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 IL36BQ9NZH7 164 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 NAT8BQ9UHF3 227 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 GCGP01275 180 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 HLA-DQA1P01909 254 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 AMBPP02760 352 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 SPRNQ5BIV9 151 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 UBE2E2Q96LR5 201 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 NDUFA4L2Q9NRX3 87 aa4.73□□□□□ -1.65
CPS1-207ENST00000479988 A8MWL6 223 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 ATP5G3P48201 142 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 ACTL10Q5JWF8 245 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 PACRGQ96M98 296 aaPredicted RBP4.72□□□□□ -1.65
CPS1-207ENST00000479988 SCRT1Q9BWW7 348 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 SNRPCP09234 159 aaKnown RBP4.72□□□□□ -1.65
CPS1-207ENST00000479988 CRYBB3P26998 211 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 DEFB131AP59861 70 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 AMMECR1LQ6DCA0 310 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 TMEM183AQ8IXX5 376 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 C5orf17Q8NAS9 161 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 NUDT10Q8NFP7 164 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 TRGV9Q99603 122 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 KLK5Q9Y337 293 aaPredicted RBP4.72□□□□□ -1.65
CPS1-207ENST00000479988 C20orf202A1L168 122 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 UBE2L6O14933 153 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 HOXD3P31249 432 aaPredicted RBP4.72□□□□□ -1.65
CPS1-207ENST00000479988 PDZD11Q5EBL8 140 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 DNLZQ5SXM8 178 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 IBA57Q5T440 356 aaKnown RBP4.72□□□□□ -1.65
CPS1-207ENST00000479988 MIR17HGQ75NE6 70 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 LINC00305Q7Z4B0 112 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 LINC01551Q86U37 167 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 ODF3L1Q8IXM7 274 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 TMEM170AQ8WVE7 144 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 LSM4Q9Y4Z0 139 aaKnown RBP4.72□□□□□ -1.65
CPS1-207ENST00000479988 PHLDA3Q9Y5J5 127 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 TMEM89A2RUT3 159 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 PGPA6NDG6 321 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 MMP23AO75900 390 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 MGPP08493 103 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 LINC00205P59089 165 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 DEFB136Q30KP8 78 aa4.72□□□□□ -1.65
CPS1-207ENST00000479988 TRGV4A0A0C4DH28 118 aa4.71□□□□□ -1.65
CPS1-207ENST00000479988 NPIPB6E9PJ23 425 aa4.71□□□□□ -1.65
CPS1-207ENST00000479988 IGKV1-16P04430 117 aa4.71□□□□□ -1.65
CPS1-207ENST00000479988 PFN1P07737 140 aaKnown RBP4.71□□□□□ -1.65
CPS1-207ENST00000479988 NBEAP1P0C6P0 100 aa4.71□□□□□ -1.65
CPS1-207ENST00000479988 PRNTQ86SH4 94 aa4.71□□□□□ -1.65
CPS1-207ENST00000479988 OR10W1Q8NGF6 305 aa4.71□□□□□ -1.65
CPS1-207ENST00000479988 SORL1Q92673 2214 aa4.71□□□□□ -1.65
CPS1-207ENST00000479988 SCO2A0A1W2PP80 73 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 ISLRO14498 428 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 TCAPO15273 167 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST1H2BKO60814 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 INSP01308 110 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST1H2BJP06899 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST1H2BOP23527 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST1H2BBP33778 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST1H2BDP58876 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST1H2BCP62807 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 PRR20EP86478 221 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 PRR20CP86479 221 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 PRR20DP86480 221 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 PRR20BP86481 221 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 PRR20AP86496 221 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST2H2BEQ16778 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 CENPWQ5EE01 88 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST1H2BHQ93079 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 C11orf52Q96A22 123 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST1H2BNQ99877 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 HIST1H2BMQ99879 126 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 CHD3Q12873 2000 aaKnown RBP4.71□□□□□ -1.66
CPS1-207ENST00000479988 A6NDX4 124 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 TYMSP04818 313 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 C4orf48Q5BLP8 95 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 FAM53AQ6NSI3 398 aaPredicted RBP4.71□□□□□ -1.66
CPS1-207ENST00000479988 Q6ZSV7 163 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 C9orf139Q6ZV77 190 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 MKI67P46013 3256 aaKnown RBP4.71□□□□□ -1.66
CPS1-207ENST00000479988 DYSFO75923 2080 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 NDUFA4O00483 81 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 PROP1O75360 226 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 CA1P00915 261 aaPredicted RBP4.71□□□□□ -1.66
CPS1-207ENST00000479988 P01737 135 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 CXCL1P09341 107 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 CAMPP49913 170 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 GCSAMLQ5JQS6 135 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 Q8N7P7 452 aa4.71□□□□□ -1.66
CPS1-207ENST00000479988 SOX21Q9Y651 276 aaPredicted RBP4.71□□□□□ -1.66
CPS1-207ENST00000479988 USP24Q9UPU5 2620 aa4.7□□□□□ -1.66
CPS1-207ENST00000479988 BRWD1-AS2P59051 145 aa4.7□□□□□ -1.66
CPS1-207ENST00000479988 FBLN7Q53RD9 439 aa4.7□□□□□ -1.66
CPS1-207ENST00000479988 OCC1Q8TAD7 63 aa4.7□□□□□ -1.66
CPS1-207ENST00000479988 SMIM12Q96EX1 92 aa4.7□□□□□ -1.66
CPS1-207ENST00000479988 KCNS1Q96KK3 526 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms