RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 FAM74A1Q5RGS3 127 aa13.92□□□□□ -0.18
RUNX3-204ENST00000479341 RNF141Q8WVD5 230 aa13.92□□□□□ -0.18
RUNX3-204ENST00000479341 MBD3L1Q8WWY6 194 aa13.92□□□□□ -0.18
RUNX3-204ENST00000479341 FXYD5Q96DB9 178 aa13.92□□□□□ -0.18
RUNX3-204ENST00000479341 SNRPCP09234 159 aaKnown RBP13.91□□□□□ -0.18
RUNX3-204ENST00000479341 ARL14EPLP0DKL9 152 aa13.91□□□□□ -0.18
RUNX3-204ENST00000479341 GUK1Q16774 197 aa13.91□□□□□ -0.18
RUNX3-204ENST00000479341 SAT2Q96F10 170 aaPredicted RBP13.91□□□□□ -0.18
RUNX3-204ENST00000479341 CXorf1O96002 111 aa13.9□□□□□ -0.18
RUNX3-204ENST00000479341 OR10J4P0C629 311 aa13.9□□□□□ -0.18
RUNX3-204ENST00000479341 NBEAP1P0C6P0 100 aa13.9□□□□□ -0.18
RUNX3-204ENST00000479341 SAMD13Q5VXD3 122 aa13.9□□□□□ -0.18
RUNX3-204ENST00000479341 TEX261Q6UWH6 196 aa13.9□□□□□ -0.18
RUNX3-204ENST00000479341 LCN15Q6UWW0 184 aa13.9□□□□□ -0.18
RUNX3-204ENST00000479341 FAM24BQ8N5W8 94 aa13.9□□□□□ -0.18
RUNX3-204ENST00000479341 TRBV19A0A075B6N1 114 aa13.89□□□□□ -0.19
RUNX3-204ENST00000479341 TRAV8-2A0A0B4J237 113 aa13.89□□□□□ -0.19
RUNX3-204ENST00000479341 MAP1LC3B2A6NCE7 125 aa13.89□□□□□ -0.19
RUNX3-204ENST00000479341 H3BTX0 84 aa13.89□□□□□ -0.19
RUNX3-204ENST00000479341 GCHFRP30047 84 aa13.89□□□□□ -0.19
RUNX3-204ENST00000479341 UBE2L3P68036 154 aaKnown RBP13.89□□□□□ -0.19
RUNX3-204ENST00000479341 SUN5Q8TC36 379 aa13.89□□□□□ -0.19
RUNX3-204ENST00000479341 MAP1LC3BQ9GZQ8 125 aa13.89□□□□□ -0.19
RUNX3-204ENST00000479341 ISLRO14498 428 aa13.88□□□□□ -0.19
RUNX3-204ENST00000479341 ZNF253O75346 499 aa13.88□□□□□ -0.19
RUNX3-204ENST00000479341 NDUFB4O95168 129 aa13.88□□□□□ -0.19
RUNX3-204ENST00000479341 CD7P09564 240 aa13.88□□□□□ -0.19
RUNX3-204ENST00000479341 H2AFB1P0C5Y9 115 aa13.88□□□□□ -0.19
RUNX3-204ENST00000479341 FGF8P55075 233 aaPredicted RBP13.88□□□□□ -0.19
RUNX3-204ENST00000479341 ZNF680Q8NEM1 530 aa13.88□□□□□ -0.19
RUNX3-204ENST00000479341 C16orf92Q96LL3 132 aa13.88□□□□□ -0.19
RUNX3-204ENST00000479341 ZNF331Q9NQX6 463 aaPredicted RBP13.88□□□□□ -0.19
RUNX3-204ENST00000479341 C19orf73Q9NVV2 129 aa13.88□□□□□ -0.19
RUNX3-204ENST00000479341 SLC17A3O00476 420 aa13.87□□□□□ -0.19
RUNX3-204ENST00000479341 PSMB3P49720 205 aa13.87□□□□□ -0.19
RUNX3-204ENST00000479341 CMC4P56277 68 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-204ENST00000479341 PDE6HQ13956 83 aa13.87□□□□□ -0.19
RUNX3-204ENST00000479341 Q8N1Y9 231 aa13.87□□□□□ -0.19
RUNX3-204ENST00000479341 SFT2D1Q8WV19 159 aa13.87□□□□□ -0.19
RUNX3-204ENST00000479341 BLNKQ8WV28 456 aa13.87□□□□□ -0.19
RUNX3-204ENST00000479341 PRR25Q96S07 402 aa13.87□□□□□ -0.19
RUNX3-204ENST00000479341 SLC50A1Q9BRV3 221 aa13.87□□□□□ -0.19
RUNX3-204ENST00000479341 NOTCH1P46531 2555 aa13.87□□□□□ -0.19
RUNX3-204ENST00000479341 TRAV1-1A0A0B4J248 108 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 ZNF705EA8MWA4 302 aaPredicted RBP13.86□□□□□ -0.19
RUNX3-204ENST00000479341 ZNF688P0C7X2 276 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 ID1P41134 155 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 DEFA6Q01524 100 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 ODF3L2Q3SX64 289 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 IGFL4Q6B9Z1 124 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 LRRC20Q8TCA0 184 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 FAM110AQ9BQ89 295 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 TMPRSS5Q9H3S3 457 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 MAP6D1Q9H9H5 199 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 TMEM167BQ9NRX6 74 aa13.86□□□□□ -0.19
RUNX3-204ENST00000479341 IFNA7P01567 189 aa13.85□□□□□ -0.19
RUNX3-204ENST00000479341 CD81P60033 236 aa13.85□□□□□ -0.19
RUNX3-204ENST00000479341 SNRPD3P62318 126 aaKnown RBP13.85□□□□□ -0.19
RUNX3-204ENST00000479341 GTSCR1Q86UQ5 136 aa13.85□□□□□ -0.19
RUNX3-204ENST00000479341 C20orf173Q96LM9 149 aa13.85□□□□□ -0.19
RUNX3-204ENST00000479341 HLA-DMBP28068 263 aa13.84□□□□□ -0.19
RUNX3-204ENST00000479341 DEFB131AP59861 70 aa13.84□□□□□ -0.19
RUNX3-204ENST00000479341 BLOC1S1P78537 153 aa13.84□□□□□ -0.19
RUNX3-204ENST00000479341 PSG9Q00887 426 aa13.84□□□□□ -0.19
RUNX3-204ENST00000479341 CLEC5AQ9NY25 188 aa13.84□□□□□ -0.19
RUNX3-204ENST00000479341 UBQLN2Q9UHD9 624 aa13.84□□□□□ -0.19
RUNX3-204ENST00000479341 HBE1P02100 147 aa13.83□□□□□ -0.2
RUNX3-204ENST00000479341 IFITM2Q01629 132 aa13.83□□□□□ -0.2
RUNX3-204ENST00000479341 PSG3Q16557 428 aa13.83□□□□□ -0.2
RUNX3-204ENST00000479341 PSMG4Q5JS54 123 aa13.83□□□□□ -0.2
RUNX3-204ENST00000479341 IQCF2Q8IXL9 164 aa13.83□□□□□ -0.2
RUNX3-204ENST00000479341 LYPD1Q8N2G4 141 aa13.83□□□□□ -0.2
RUNX3-204ENST00000479341 RNF182Q8N6D2 247 aa13.83□□□□□ -0.2
RUNX3-204ENST00000479341 LINC00052Q96N35 136 aa13.83□□□□□ -0.2
RUNX3-204ENST00000479341 A0A1B0GV50 99 aa13.82□□□□□ -0.2
RUNX3-204ENST00000479341 OR11H12B2RN74 326 aa13.82□□□□□ -0.2
RUNX3-204ENST00000479341 RANP62826 216 aaKnown RBP13.82□□□□□ -0.2
RUNX3-204ENST00000479341 CCL20P78556 96 aa13.82□□□□□ -0.2
RUNX3-204ENST00000479341 EXOC3-AS1Q8N2X6 119 aa13.82□□□□□ -0.2
RUNX3-204ENST00000479341 AURKAIP1Q9NWT8 199 aaPredicted RBP13.82□□□□□ -0.2
RUNX3-204ENST00000479341 ICAM4Q14773 271 aa13.81□□□□□ -0.2
RUNX3-204ENST00000479341 LYPD6BQ8NI32 183 aa13.81□□□□□ -0.2
RUNX3-204ENST00000479341 WFDC10AQ9H1F0 79 aa13.81□□□□□ -0.2
RUNX3-204ENST00000479341 Q9H3A6 140 aa13.81□□□□□ -0.2
RUNX3-204ENST00000479341 OTORQ9NRC9 128 aa13.81□□□□□ -0.2
RUNX3-204ENST00000479341 PRELID1Q9Y255 219 aa13.81□□□□□ -0.2
RUNX3-204ENST00000479341 A0A1W2PRE2 83 aa13.8□□□□□ -0.2
RUNX3-204ENST00000479341 TEX46H3BTG2 121 aa13.8□□□□□ -0.2
RUNX3-204ENST00000479341 PRB2P02812 416 aaPredicted RBP13.8□□□□□ -0.2
RUNX3-204ENST00000479341 APRG1Q8IVJ8 170 aa13.8□□□□□ -0.2
RUNX3-204ENST00000479341 MRPL53Q96EL3 112 aaKnown RBP13.8□□□□□ -0.2
RUNX3-204ENST00000479341 AAMDCQ9H7C9 122 aa13.8□□□□□ -0.2
RUNX3-204ENST00000479341 PGPA6NDG6 321 aa13.79□□□□□ -0.2
RUNX3-204ENST00000479341 M0R3E3 92 aa13.79□□□□□ -0.2
RUNX3-204ENST00000479341 DEFB1P60022 68 aa13.79□□□□□ -0.2
RUNX3-204ENST00000479341 PMS2P11Q13670 270 aa13.79□□□□□ -0.2
RUNX3-204ENST00000479341 ZNF124Q15973 351 aa13.79□□□□□ -0.2
RUNX3-204ENST00000479341 DEFB125Q8N687 156 aa13.79□□□□□ -0.2
RUNX3-204ENST00000479341 CITED4Q96RK1 184 aa13.79□□□□□ -0.2
RUNX3-204ENST00000479341 YTHDF2Q9Y5A9 579 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms