RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 IGLC2P0DOY2 106 aa11.32□□□□□ -0.6
C9orf3-217ENST00000479161 DEFB135Q30KP9 77 aa11.32□□□□□ -0.6
C9orf3-217ENST00000479161 MUC7Q8TAX7 377 aa11.32□□□□□ -0.6
C9orf3-217ENST00000479161 RETNQ9HD89 108 aa11.32□□□□□ -0.6
C9orf3-217ENST00000479161 RYR3Q15413 4870 aa11.31□□□□□ -0.6
C9orf3-217ENST00000479161 TRAV8-2A0A0B4J237 113 aa11.31□□□□□ -0.6
C9orf3-217ENST00000479161 A0A0J9YX75 114 aa11.31□□□□□ -0.6
C9orf3-217ENST00000479161 CA1P00915 261 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-217ENST00000479161 ZNF266Q14584 549 aa11.31□□□□□ -0.6
C9orf3-217ENST00000479161 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
C9orf3-217ENST00000479161 SCGB1C1Q8TD33 95 aa11.31□□□□□ -0.6
C9orf3-217ENST00000479161 LINC00052Q96N35 136 aa11.31□□□□□ -0.6
C9orf3-217ENST00000479161 MRPL32Q9BYC8 188 aaKnown RBP11.31□□□□□ -0.6
C9orf3-217ENST00000479161 S100A1P23297 94 aa11.3□□□□□ -0.6
C9orf3-217ENST00000479161 PDE6HQ13956 83 aa11.3□□□□□ -0.6
C9orf3-217ENST00000479161 MORN5Q5VZ52 161 aa11.3□□□□□ -0.6
C9orf3-217ENST00000479161 CSNK1G2-AS1Q8NCQ2 148 aa11.3□□□□□ -0.6
C9orf3-217ENST00000479161 SAT2Q96F10 170 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-217ENST00000479161 ZNF331Q9NQX6 463 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-217ENST00000479161 TIMM9Q9Y5J7 89 aa11.3□□□□□ -0.6
C9orf3-217ENST00000479161 ZNF705EA8MWA4 302 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-217ENST00000479161 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
C9orf3-217ENST00000479161 C1QBP02746 253 aa11.29□□□□□ -0.6
C9orf3-217ENST00000479161 IFITM2Q01629 132 aa11.29□□□□□ -0.6
C9orf3-217ENST00000479161 PSG3Q16557 428 aa11.29□□□□□ -0.6
C9orf3-217ENST00000479161 INO80EQ8NBZ0 244 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-217ENST00000479161 OR2T35Q8NGX2 323 aa11.29□□□□□ -0.6
C9orf3-217ENST00000479161 C20orf173Q96LM9 149 aa11.29□□□□□ -0.6
C9orf3-217ENST00000479161 RARRES2Q99969 163 aa11.29□□□□□ -0.6
C9orf3-217ENST00000479161 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
C9orf3-217ENST00000479161 Q5BKY6 102 aa11.28□□□□□ -0.6
C9orf3-217ENST00000479161 GDF5OSQ5U4N7 250 aa11.28□□□□□ -0.6
C9orf3-217ENST00000479161 FAM78BQ5VT40 261 aa11.28□□□□□ -0.6
C9orf3-217ENST00000479161 LRRC20Q8TCA0 184 aa11.28□□□□□ -0.6
C9orf3-217ENST00000479161 C11orf68Q9H3H3 251 aaKnown RBP11.28□□□□□ -0.6
C9orf3-217ENST00000479161 WFDC1Q9HC57 220 aa11.28□□□□□ -0.6
C9orf3-217ENST00000479161 TNFSF18Q9UNG2 199 aa11.28□□□□□ -0.6
C9orf3-217ENST00000479161 AMBPP02760 352 aa11.27□□□□□ -0.61
C9orf3-217ENST00000479161 C4BPBP20851 252 aa11.27□□□□□ -0.61
C9orf3-217ENST00000479161 PSG9Q00887 426 aa11.27□□□□□ -0.61
C9orf3-217ENST00000479161 OR11H2Q8NH07 326 aa11.27□□□□□ -0.61
C9orf3-217ENST00000479161 MRPL53Q96EL3 112 aaKnown RBP11.27□□□□□ -0.61
C9orf3-217ENST00000479161 FAM167A-AS1Q96KT0 104 aa11.27□□□□□ -0.61
C9orf3-217ENST00000479161 CSMD3Q7Z407 3707 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 TRBV19A0A075B6N1 114 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 G3V3Q6 166 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 H3BQ15 152 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 MIFP14174 115 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-217ENST00000479161 OR2G3Q8NGZ4 309 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 NEU1Q99519 415 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 PSMG3Q9BT73 122 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-217ENST00000479161 SMIM3Q9BZL3 60 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 FUT9Q9Y231 359 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 PRELID1Q9Y255 219 aa11.26□□□□□ -0.61
C9orf3-217ENST00000479161 TRAV5A0A0B4J249 113 aa11.25□□□□□ -0.61
C9orf3-217ENST00000479161 RNF222A6NCQ9 220 aa11.25□□□□□ -0.61
C9orf3-217ENST00000479161 RHOBP62745 196 aa11.25□□□□□ -0.61
C9orf3-217ENST00000479161 SERF2P84101 59 aa11.25□□□□□ -0.61
C9orf3-217ENST00000479161 GCSAMLQ5JQS6 135 aa11.25□□□□□ -0.61
C9orf3-217ENST00000479161 AMTNQ6UX39 209 aa11.25□□□□□ -0.61
C9orf3-217ENST00000479161 OR8A1Q8NGG7 326 aa11.25□□□□□ -0.61
C9orf3-217ENST00000479161 ZNF586Q9NXT0 402 aa11.25□□□□□ -0.61
C9orf3-217ENST00000479161 SMIM9A6NGZ8 99 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 TAAR5O14804 337 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 M6PRP20645 277 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
C9orf3-217ENST00000479161 TAS2R45P59539 299 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-217ENST00000479161 FFAR4Q5NUL3 377 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 ZNF705AQ6ZN79 300 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-217ENST00000479161 RNF182Q8N6D2 247 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 ZNF738Q8NE65 137 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 OR4B1Q8NGF8 309 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 RPUSD4Q96CM3 377 aaKnown RBP11.24□□□□□ -0.61
C9orf3-217ENST00000479161 HYLS1Q96M11 299 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 SLC25A2Q9BXI2 301 aa11.24□□□□□ -0.61
C9orf3-217ENST00000479161 A0A0J9YWU9 116 aa11.23□□□□□ -0.61
C9orf3-217ENST00000479161 HMSDA8MTL9 139 aa11.23□□□□□ -0.61
C9orf3-217ENST00000479161 ZNF705FA8MVS1 300 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-217ENST00000479161 F6UB75 175 aa11.23□□□□□ -0.61
C9orf3-217ENST00000479161 NBEAP1P0C6P0 100 aa11.23□□□□□ -0.61
C9orf3-217ENST00000479161 ZNF705DP0CH99 300 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-217ENST00000479161 ZNF705BP0CI00 300 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-217ENST00000479161 DEFB1P60022 68 aa11.23□□□□□ -0.61
C9orf3-217ENST00000479161 LYPD1Q8N2G4 141 aa11.23□□□□□ -0.61
C9orf3-217ENST00000479161 Q8NAQ8 132 aa11.23□□□□□ -0.61
C9orf3-217ENST00000479161 OR51M1Q9H341 326 aa11.23□□□□□ -0.61
C9orf3-217ENST00000479161 FXYD6-FXYD2A0A087WZ82 144 aa11.22□□□□□ -0.61
C9orf3-217ENST00000479161 SLC17A3O00476 420 aa11.22□□□□□ -0.61
C9orf3-217ENST00000479161 NDUFB4O95168 129 aa11.22□□□□□ -0.61
C9orf3-217ENST00000479161 MBP02144 154 aa11.22□□□□□ -0.61
C9orf3-217ENST00000479161 ZNF345Q14585 488 aa11.22□□□□□ -0.61
C9orf3-217ENST00000479161 IGFL4Q6B9Z1 124 aa11.22□□□□□ -0.61
C9orf3-217ENST00000479161 MIR17HGQ75NE6 70 aa11.22□□□□□ -0.61
C9orf3-217ENST00000479161 GNPNAT1Q96EK6 184 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-217ENST00000479161 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
C9orf3-217ENST00000479161 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
C9orf3-217ENST00000479161 X6R8D5 127 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms