RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 RHOBP62745 196 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 PSG3Q16557 428 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 CNPY1Q3B7I2 92 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 UBE2DNLQ8IWF7 75 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 OR8A1Q8NGG7 326 aa16.17■□□□□ 0.18
C9orf3-216ENST00000478603 NACAE9PAV3 2078 aa16.16■□□□□ 0.18
C9orf3-216ENST00000478603 TRAV6A0A075B6T7 132 aa16.16■□□□□ 0.18
C9orf3-216ENST00000478603 TMEM88Q6PEY1 159 aa16.16■□□□□ 0.18
C9orf3-216ENST00000478603 LINC00305Q7Z4B0 112 aa16.16■□□□□ 0.18
C9orf3-216ENST00000478603 S100A7AQ86SG5 101 aa16.16■□□□□ 0.18
C9orf3-216ENST00000478603 ZNF546Q86UE3 836 aa16.16■□□□□ 0.18
C9orf3-216ENST00000478603 LSM5Q9Y4Y9 91 aaKnown RBP16.16■□□□□ 0.18
C9orf3-216ENST00000478603 IGLV2-18A0A075B6J9 118 aa16.15■□□□□ 0.18
C9orf3-216ENST00000478603 FAM25EA8MYX2 175 aa16.15■□□□□ 0.18
C9orf3-216ENST00000478603 L7N2F9 121 aa16.15■□□□□ 0.18
C9orf3-216ENST00000478603 AZU1P20160 251 aa16.15■□□□□ 0.18
C9orf3-216ENST00000478603 VAMP2P63027 116 aa16.15■□□□□ 0.18
C9orf3-216ENST00000478603 LINC00336Q6ZUF6 198 aa16.15■□□□□ 0.18
C9orf3-216ENST00000478603 MGST2Q99735 147 aa16.15■□□□□ 0.18
C9orf3-216ENST00000478603 SEC22CQ9BRL7 303 aa16.15■□□□□ 0.18
C9orf3-216ENST00000478603 DNAH17Q9UFH2 4485 aa16.15■□□□□ 0.18
C9orf3-216ENST00000478603 TCRBP04435 133 aa16.14■□□□□ 0.17
C9orf3-216ENST00000478603 ZNF846Q147U1 533 aa16.14■□□□□ 0.17
C9orf3-216ENST00000478603 RPUSD4Q96CM3 377 aaKnown RBP16.14■□□□□ 0.17
C9orf3-216ENST00000478603 GGACTQ9BVM4 153 aa16.14■□□□□ 0.17
C9orf3-216ENST00000478603 PPP1R14DQ9NXH3 145 aa16.14■□□□□ 0.17
C9orf3-216ENST00000478603 RTL8CO15255 209 aa16.13■□□□□ 0.17
C9orf3-216ENST00000478603 BCAP31P51572 246 aa16.13■□□□□ 0.17
C9orf3-216ENST00000478603 FCN2Q15485 313 aa16.13■□□□□ 0.17
C9orf3-216ENST00000478603 PXDC1Q5TGL8 231 aa16.13■□□□□ 0.17
C9orf3-216ENST00000478603 MORN5Q5VZ52 161 aa16.13■□□□□ 0.17
C9orf3-216ENST00000478603 TMEM37Q8WXS4 190 aa16.13■□□□□ 0.17
C9orf3-216ENST00000478603 LINC01587Q99440 93 aa16.13■□□□□ 0.17
C9orf3-216ENST00000478603 PLAC8L1A1L4L8 177 aa16.12■□□□□ 0.17
C9orf3-216ENST00000478603 H3BTX0 84 aa16.12■□□□□ 0.17
C9orf3-216ENST00000478603 COX7A2P2O60397 106 aa16.12■□□□□ 0.17
C9orf3-216ENST00000478603 DEFB130BP0DP73 79 aa16.12■□□□□ 0.17
C9orf3-216ENST00000478603 DEFB130AP0DP74 79 aa16.12■□□□□ 0.17
C9orf3-216ENST00000478603 B2MP61769 119 aa16.12■□□□□ 0.17
C9orf3-216ENST00000478603 ZNF331Q9NQX6 463 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-216ENST00000478603 NUDT15Q9NV35 164 aa16.12■□□□□ 0.17
C9orf3-216ENST00000478603 A0A1B0GVY2 172 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 C5orf51A6NDU8 294 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 LYRM9A8MSI8 78 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 CST7O76096 145 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 HTN1P15515 57 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 TSPOP30536 169 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 LGALS9BQ3B8N2 356 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 LCN15Q6UWW0 184 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 ZNF431Q8TF32 576 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-216ENST00000478603 KRTAP17-1Q9BYP8 105 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 RNF24Q9Y225 148 aa16.11■□□□□ 0.17
C9orf3-216ENST00000478603 FAM24AA6NFZ4 105 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 PRSS29PA6NIE9 313 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 SLC17A3O00476 420 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 CXCL2P19875 107 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 CAV2P51636 162 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 OPCMLQ14982 345 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 C10orf113Q5VZT2 155 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 BPIFA4PQ86YQ2 179 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 C11orf1Q9H5F2 150 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 KIAA1109Q2LD37 5005 aa16.1■□□□□ 0.17
C9orf3-216ENST00000478603 CAMLGP49069 296 aa16.09■□□□□ 0.17
C9orf3-216ENST00000478603 KIR3DS1Q14943 382 aa16.09■□□□□ 0.17
C9orf3-216ENST00000478603 MIC13Q5XKP0 118 aa16.09■□□□□ 0.17
C9orf3-216ENST00000478603 NRARPQ7Z6K4 114 aa16.09■□□□□ 0.17
C9orf3-216ENST00000478603 C12orf45Q8N5I9 185 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-216ENST00000478603 SLC50A1Q9BRV3 221 aa16.09■□□□□ 0.17
C9orf3-216ENST00000478603 PARD6GQ9BYG4 376 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-216ENST00000478603 PRAC2D3DTV9 90 aa16.08■□□□□ 0.16
C9orf3-216ENST00000478603 CDKN1BP46527 198 aa16.08■□□□□ 0.16
C9orf3-216ENST00000478603 TAS2R60P59551 318 aa16.08■□□□□ 0.16
C9orf3-216ENST00000478603 RNF212Q495C1 297 aa16.08■□□□□ 0.16
C9orf3-216ENST00000478603 TMEM256Q8N2U0 113 aa16.08■□□□□ 0.16
C9orf3-216ENST00000478603 C2orf50Q96LR7 162 aa16.08■□□□□ 0.16
C9orf3-216ENST00000478603 TRAV5A0A0B4J249 113 aa16.07■□□□□ 0.16
C9orf3-216ENST00000478603 H3BQ15 152 aa16.07■□□□□ 0.16
C9orf3-216ENST00000478603 Q6ZR54 194 aa16.07■□□□□ 0.16
C9orf3-216ENST00000478603 DNAJC4Q9NNZ3 241 aa16.07■□□□□ 0.16
C9orf3-216ENST00000478603 NDUFA13Q9P0J0 144 aa16.07■□□□□ 0.16
C9orf3-216ENST00000478603 F5H768 121 aa16.06■□□□□ 0.16
C9orf3-216ENST00000478603 H2AFB2P0C5Z0 115 aa16.06■□□□□ 0.16
C9orf3-216ENST00000478603 IGLC2P0DOY2 106 aa16.06■□□□□ 0.16
C9orf3-216ENST00000478603 S100A10P60903 97 aa16.06■□□□□ 0.16
C9orf3-216ENST00000478603 Q6ZRG5 221 aa16.06■□□□□ 0.16
C9orf3-216ENST00000478603 C15orf53Q8NAA6 179 aa16.06■□□□□ 0.16
C9orf3-216ENST00000478603 UQCC1Q9NVA1 299 aa16.06■□□□□ 0.16
C9orf3-216ENST00000478603 WDR83OSQ9Y284 106 aa16.06■□□□□ 0.16
C9orf3-216ENST00000478603 PKHD1P08F94 4074 aa16.06■□□□□ 0.16
C9orf3-216ENST00000478603 RAB31Q13636 194 aa16.05■□□□□ 0.16
C9orf3-216ENST00000478603 SAT2Q96F10 170 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-216ENST00000478603 C16orf74Q96GX8 76 aa16.05■□□□□ 0.16
C9orf3-216ENST00000478603 UBE2L5PA0A1B0GUS4 154 aa16.04■□□□□ 0.16
C9orf3-216ENST00000478603 IGSF23A1L1A6 192 aa16.04■□□□□ 0.16
C9orf3-216ENST00000478603 PVALBP20472 110 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-216ENST00000478603 RAB32Q13637 225 aa16.04■□□□□ 0.16
C9orf3-216ENST00000478603 OR10J6PQ8NGY7 276 aa16.04■□□□□ 0.16
C9orf3-216ENST00000478603 CCDC32Q9BV29 185 aa16.04■□□□□ 0.16
C9orf3-216ENST00000478603 FAM240BA0A1B0GVZ2 78 aa16.03■□□□□ 0.16
C9orf3-216ENST00000478603 ATP5G1P05496 136 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms