RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 OR11H7Q8NGC8 314 aa16.79■□□□□ 0.28
C9orf3-215ENST00000478473 GOLT1BQ9Y3E0 138 aa16.79■□□□□ 0.28
C9orf3-215ENST00000478473 KMT2AQ03164 3969 aa16.79■□□□□ 0.28
C9orf3-215ENST00000478473 VPS13DQ5THJ4 4388 aa16.78■□□□□ 0.28
C9orf3-215ENST00000478473 IGSF23A1L1A6 192 aa16.78■□□□□ 0.28
C9orf3-215ENST00000478473 RPL29P47914 159 aaKnown RBP16.78■□□□□ 0.28
C9orf3-215ENST00000478473 ATP6V1FQ16864 119 aa16.78■□□□□ 0.28
C9orf3-215ENST00000478473 NRARPQ7Z6K4 114 aa16.78■□□□□ 0.28
C9orf3-215ENST00000478473 MARVELD1Q9BSK0 173 aa16.78■□□□□ 0.28
C9orf3-215ENST00000478473 CRXO43186 299 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-215ENST00000478473 S100A10P60903 97 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 HBG1P69891 147 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 HBG2P69892 147 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 FGL1Q08830 312 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 PSG3Q16557 428 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 LCN15Q6UWW0 184 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 STX12Q86Y82 276 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 BPIFA4PQ86YQ2 179 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 RNF126Q9BV68 326 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 NMES1Q9C002 83 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 DNAJC4Q9NNZ3 241 aa16.77■□□□□ 0.28
C9orf3-215ENST00000478473 ZNF331Q9NQX6 463 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-215ENST00000478473 TEX48A0A1B0GUV7 120 aa16.76■□□□□ 0.27
C9orf3-215ENST00000478473 COX7A2P2O60397 106 aa16.76■□□□□ 0.27
C9orf3-215ENST00000478473 IGLC2P0DOY2 106 aa16.76■□□□□ 0.27
C9orf3-215ENST00000478473 OPCMLQ14982 345 aa16.76■□□□□ 0.27
C9orf3-215ENST00000478473 Q6ZRG5 221 aa16.76■□□□□ 0.27
C9orf3-215ENST00000478473 OR8A1Q8NGG7 326 aa16.76■□□□□ 0.27
C9orf3-215ENST00000478473 SLC50A1Q9BRV3 221 aa16.76■□□□□ 0.27
C9orf3-215ENST00000478473 BATF3Q9NR55 127 aa16.76■□□□□ 0.27
C9orf3-215ENST00000478473 IGLL5B9A064 214 aa16.75■□□□□ 0.27
C9orf3-215ENST00000478473 INMT-MINDY4F8WBC2 141 aa16.75■□□□□ 0.27
C9orf3-215ENST00000478473 SPART-AS1P0CW21 52 aa16.75■□□□□ 0.27
C9orf3-215ENST00000478473 MORN5Q5VZ52 161 aa16.75■□□□□ 0.27
C9orf3-215ENST00000478473 C10orf113Q5VZT2 155 aa16.75■□□□□ 0.27
C9orf3-215ENST00000478473 ZNF738Q8NE65 137 aa16.75■□□□□ 0.27
C9orf3-215ENST00000478473 DKK2Q9UBU2 259 aa16.75■□□□□ 0.27
C9orf3-215ENST00000478473 MPDU1O75352 247 aa16.74■□□□□ 0.27
C9orf3-215ENST00000478473 HBE1P02100 147 aa16.74■□□□□ 0.27
C9orf3-215ENST00000478473 B2MP61769 119 aa16.74■□□□□ 0.27
C9orf3-215ENST00000478473 OXA1LQ15070 435 aa16.74■□□□□ 0.27
C9orf3-215ENST00000478473 MIC13Q5XKP0 118 aa16.74■□□□□ 0.27
C9orf3-215ENST00000478473 OR1L4Q8NGR5 311 aa16.74■□□□□ 0.27
C9orf3-215ENST00000478473 SAT2Q96F10 170 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-215ENST00000478473 PFDN5Q99471 154 aa16.74■□□□□ 0.27
C9orf3-215ENST00000478473 IGHV3OR16-12A0A075B7B8 117 aa16.73■□□□□ 0.27
C9orf3-215ENST00000478473 DEFB131BA0A096LNP1 70 aa16.73■□□□□ 0.27
C9orf3-215ENST00000478473 CYCSP99999 105 aaKnown RBP16.73■□□□□ 0.27
C9orf3-215ENST00000478473 SLC39A9Q9NUM3 307 aa16.73■□□□□ 0.27
C9orf3-215ENST00000478473 IGHV4-4A0A075B6R2 117 aa16.72■□□□□ 0.27
C9orf3-215ENST00000478473 BOLA2-SMG1P6H3BVE0 249 aa16.72■□□□□ 0.27
C9orf3-215ENST00000478473 SPINK13Q1W4C9 94 aa16.72■□□□□ 0.27
C9orf3-215ENST00000478473 RRN3P1Q2M238 152 aa16.72■□□□□ 0.27
C9orf3-215ENST00000478473 LRRC20Q8TCA0 184 aa16.72■□□□□ 0.27
C9orf3-215ENST00000478473 BIRC6Q9NR09 4857 aa16.71■□□□□ 0.27
C9orf3-215ENST00000478473 UBE2L5PA0A1B0GUS4 154 aa16.71■□□□□ 0.27
C9orf3-215ENST00000478473 E5RGE8 158 aa16.71■□□□□ 0.27
C9orf3-215ENST00000478473 M0R2Z0 102 aa16.71■□□□□ 0.27
C9orf3-215ENST00000478473 INSP01308 110 aa16.71■□□□□ 0.27
C9orf3-215ENST00000478473 TSPOP30536 169 aa16.71■□□□□ 0.27
C9orf3-215ENST00000478473 GUK1Q16774 197 aa16.71■□□□□ 0.27
C9orf3-215ENST00000478473 RPP25LQ8N5L8 163 aaKnown RBP16.71■□□□□ 0.27
C9orf3-215ENST00000478473 RPUSD4Q96CM3 377 aaKnown RBP16.71■□□□□ 0.27
C9orf3-215ENST00000478473 PXMP4Q9Y6I8 212 aa16.71■□□□□ 0.27
C9orf3-215ENST00000478473 LOC102723971A0A1B0GUV8 181 aa16.7■□□□□ 0.26
C9orf3-215ENST00000478473 H0YIZ8 118 aa16.7■□□□□ 0.26
C9orf3-215ENST00000478473 H3BQ15 152 aa16.7■□□□□ 0.26
C9orf3-215ENST00000478473 ZNF253O75346 499 aa16.7■□□□□ 0.26
C9orf3-215ENST00000478473 SIX6O95475 246 aa16.7■□□□□ 0.26
C9orf3-215ENST00000478473 RLN2P04090 185 aa16.7■□□□□ 0.26
C9orf3-215ENST00000478473 BAXQ07812 192 aa16.7■□□□□ 0.26
C9orf3-215ENST00000478473 ZNF767PQ75MW2 155 aa16.7■□□□□ 0.26
C9orf3-215ENST00000478473 SLC25A31Q9H0C2 315 aa16.7■□□□□ 0.26
C9orf3-215ENST00000478473 H2BFSP57053 126 aa16.69■□□□□ 0.26
C9orf3-215ENST00000478473 DEFA1P59665 94 aa16.69■□□□□ 0.26
C9orf3-215ENST00000478473 DEFA3P59666 94 aa16.69■□□□□ 0.26
C9orf3-215ENST00000478473 HIST1H1AQ02539 215 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-215ENST00000478473 NHLH2Q02577 135 aa16.69■□□□□ 0.26
C9orf3-215ENST00000478473 FAM222AQ5U5X8 452 aa16.69■□□□□ 0.26
C9orf3-215ENST00000478473 FAM210BQ96KR6 192 aa16.69■□□□□ 0.26
C9orf3-215ENST00000478473 NIPSNAP3BQ9BS92 247 aa16.69■□□□□ 0.26
C9orf3-215ENST00000478473 OR5AC2Q9NZP5 309 aa16.69■□□□□ 0.26
C9orf3-215ENST00000478473 SLC17A3O00476 420 aa16.68■□□□□ 0.26
C9orf3-215ENST00000478473 FGF7P21781 194 aa16.68■□□□□ 0.26
C9orf3-215ENST00000478473 TMEM256Q8N2U0 113 aa16.68■□□□□ 0.26
C9orf3-215ENST00000478473 NPCDR1Q9BY65 106 aa16.68■□□□□ 0.26
C9orf3-215ENST00000478473 TMEM14CQ9P0S9 112 aa16.68■□□□□ 0.26
C9orf3-215ENST00000478473 YTHDF2Q9Y5A9 579 aaKnown RBP16.68■□□□□ 0.26
C9orf3-215ENST00000478473 TRAV5A0A0B4J249 113 aa16.67■□□□□ 0.26
C9orf3-215ENST00000478473 EMP1P54849 157 aa16.67■□□□□ 0.26
C9orf3-215ENST00000478473 OR5C1Q8NGR4 320 aa16.67■□□□□ 0.26
C9orf3-215ENST00000478473 TMEM208Q9BTX3 173 aa16.67■□□□□ 0.26
C9orf3-215ENST00000478473 BAP18Q8IXM2 172 aa16.66■□□□□ 0.26
C9orf3-215ENST00000478473 ZNF586Q9NXT0 402 aa16.66■□□□□ 0.26
C9orf3-215ENST00000478473 CDKN1BP46527 198 aa16.65■□□□□ 0.26
C9orf3-215ENST00000478473 RHOBP62745 196 aa16.65■□□□□ 0.26
C9orf3-215ENST00000478473 PPP1R1CQ8WVI7 109 aa16.65■□□□□ 0.26
C9orf3-215ENST00000478473 MRPL53Q96EL3 112 aaKnown RBP16.65■□□□□ 0.26
C9orf3-215ENST00000478473 C20orf144Q9BQM9 153 aa16.65■□□□□ 0.26
C9orf3-215ENST00000478473 DNAH6Q9C0G6 4158 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms