RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CCDC140Q96MF4 163 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 MLST8Q9BVC4 326 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 SOX21Q9Y651 276 aaPredicted RBP6.16□□□□□ -1.42
VMA21-203ENST00000477649 V9GYV3 84 aa6.16□□□□□ -1.42
VMA21-203ENST00000477649 SPTAN1Q13813 2472 aaKnown RBP6.16□□□□□ -1.42
VMA21-203ENST00000477649 SMIM27A0A1W2PRY6 76 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 ZNF320A2RRD8 509 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 LINC01548A6NM66 108 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 UBE2CO00762 179 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 PLXNB1O43157 2135 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 BUB3O43684 328 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 GATCO43716 136 aaKnown RBP6.15□□□□□ -1.42
VMA21-203ENST00000477649 IGLV2-8P01709 118 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 MGST1P10620 155 aaKnown RBP6.15□□□□□ -1.42
VMA21-203ENST00000477649 CFHR3Q02985 330 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 SAPCD1Q5SSQ6 148 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 LEMD1Q68G75 181 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 COX8CQ7Z4L0 72 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 DAZAP1Q96EP5 407 aaKnown RBP6.15□□□□□ -1.42
VMA21-203ENST00000477649 GFRA4Q9GZZ7 299 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 GNB4Q9HAV0 340 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 U3KQE9 123 aa6.15□□□□□ -1.42
VMA21-203ENST00000477649 CSMD1Q96PZ7 3565 aa6.15□□□□□ -1.43
VMA21-203ENST00000477649 WNK2Q9Y3S1 2297 aa6.15□□□□□ -1.43
VMA21-203ENST00000477649 LRBAP50851 2863 aa6.15□□□□□ -1.43
VMA21-203ENST00000477649 LRRK2Q5S007 2527 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 RBAKDNA6NC62 111 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 PGPEP1LA6NFU8 196 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 ZNF785A8K8V0 405 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 ZNF705GA8MUZ8 300 aaPredicted RBP6.14□□□□□ -1.43
VMA21-203ENST00000477649 A8MWL6 223 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 DIRC3C9JPN6 131 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 K7EMT4 169 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 IGHV3-23P01764 117 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 IGHV4-59P01825 116 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 TRGC2P03986 189 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 ELANEP08246 267 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 ARL3P36405 182 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 BLCAPP62952 87 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 PSG3Q16557 428 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 C4orf48Q5BLP8 95 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 ACTL10Q5JWF8 245 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 ATP5L2Q7Z4Y8 100 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 Q86TA4 180 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 MS4A10Q96PG2 267 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 GNB1LQ9BYB4 327 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 KRTAP17-1Q9BYP8 105 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 S4R3C0 116 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 AKAP6Q13023 2319 aa6.14□□□□□ -1.43
VMA21-203ENST00000477649 SH2D7A6NKC9 451 aaPredicted RBP6.13□□□□□ -1.43
VMA21-203ENST00000477649 PHOX2AO14813 284 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 P01737 135 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 CT45A10P0DMU9 189 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 PF4V1P10720 104 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 HOXA5P20719 270 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 HNF1AP20823 631 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 PSMB8P28062 276 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 RPL15P61313 204 aaKnown RBP6.13□□□□□ -1.43
VMA21-203ENST00000477649 GNG5P63218 68 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 FOXE3Q13461 319 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 OR5I1Q13606 314 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 FAM106AQ4KMX7 169 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 COA6Q5JTJ3 125 aaKnown RBP6.13□□□□□ -1.43
VMA21-203ENST00000477649 Q6AWC8 147 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 GOLT1AQ6ZVE7 132 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 ZFP82Q8N141 532 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 Q8N2B8 174 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 EXOC3-AS1Q8N2X6 119 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 CIARTQ8N365 385 aaPredicted RBP6.13□□□□□ -1.43
VMA21-203ENST00000477649 RNF152Q8N8N0 203 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 WIPF2Q8TF74 440 aaPredicted RBP6.13□□□□□ -1.43
VMA21-203ENST00000477649 TSKUQ8WUA8 353 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 NDFIP1Q9BT67 221 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 RPP21Q9H633 154 aaKnown RBP6.13□□□□□ -1.43
VMA21-203ENST00000477649 ZNF331Q9NQX6 463 aaPredicted RBP6.13□□□□□ -1.43
VMA21-203ENST00000477649 SERTAD4Q9NUC0 356 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 AURKAIP1Q9NWT8 199 aaPredicted RBP6.13□□□□□ -1.43
VMA21-203ENST00000477649 NAT8BQ9UHF3 227 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 TRAPPC1Q9Y5R8 145 aa6.13□□□□□ -1.43
VMA21-203ENST00000477649 TEP1Q99973 2627 aaKnown RBP6.13□□□□□ -1.43
VMA21-203ENST00000477649 USP9YO00507 2555 aaPredicted RBP6.12□□□□□ -1.43
VMA21-203ENST00000477649 TRAV34A0A0B4J273 112 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 XKRY2A2RUG3 117 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 CLPSL1A2RUU4 121 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 C19orf71A6NCJ1 209 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 IZUMO1RA6ND01 250 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST1H2BKO60814 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HLA-DQA1P01909 254 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST1H2BJP06899 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 TRGC1P0CF51 173 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST1H2BOP23527 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST1H2BBP33778 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 CDX1P47902 265 aaPredicted RBP6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST1H2BDP58876 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 SNRPEP62304 92 aaKnown RBP6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST1H2BCP62807 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST2H2BEQ16778 126 aa6.12□□□□□ -1.43
VMA21-203ENST00000477649 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.12□□□□□ -1.43
VMA21-203ENST00000477649 C16orf54Q6UWD8 224 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms