RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 SSR3Q9UNL2 185 aa0.69□□□□□ -2.3
SYCP1-206ENST00000477590 DOCK4Q8N1I0 1966 aa0.68□□□□□ -2.3
SYCP1-206ENST00000477590 PHRF1Q9P1Y6 1649 aaKnown RBP0.68□□□□□ -2.3
SYCP1-206ENST00000477590 RIIAD1A6NNX1 92 aa0.68□□□□□ -2.3
SYCP1-206ENST00000477590 MGAMO43451 1857 aa0.68□□□□□ -2.3
SYCP1-206ENST00000477590 CXCL1P09341 107 aa0.68□□□□□ -2.3
SYCP1-206ENST00000477590 PHBP35232 272 aa0.68□□□□□ -2.3
SYCP1-206ENST00000477590 CAPZBP47756 277 aa0.68□□□□□ -2.3
SYCP1-206ENST00000477590 HACD4Q5VWC8 232 aa0.68□□□□□ -2.3
SYCP1-206ENST00000477590 PAIP2Q9BPZ3 127 aaKnown RBP0.68□□□□□ -2.3
SYCP1-206ENST00000477590 AHNAKQ09666 5890 aaKnown RBP0.67□□□□□ -2.3
SYCP1-206ENST00000477590 UHRF1BP1Q6BDS2 1440 aa0.67□□□□□ -2.3
SYCP1-206ENST00000477590 ADGRL3Q9HAR2 1447 aa0.67□□□□□ -2.3
SYCP1-206ENST00000477590 A0A096LPI6 279 aa0.67□□□□□ -2.3
SYCP1-206ENST00000477590 hDV103S1A0JD37 113 aa0.67□□□□□ -2.3
SYCP1-206ENST00000477590 RER1O15258 196 aa0.67□□□□□ -2.3
SYCP1-206ENST00000477590 OGNP20774 298 aaKnown RBP0.67□□□□□ -2.3
SYCP1-206ENST00000477590 INSL3P51460 131 aa0.67□□□□□ -2.3
SYCP1-206ENST00000477590 CIRBPQ14011 172 aaKnown RBP0.67□□□□□ -2.3
SYCP1-206ENST00000477590 SNCBQ16143 134 aa0.67□□□□□ -2.3
SYCP1-206ENST00000477590 TMEM14EPQ6UXP3 125 aa0.67□□□□□ -2.3
SYCP1-206ENST00000477590 PTPRFP10586 1907 aa0.67□□□□□ -2.3
SYCP1-206ENST00000477590 MYLKQ15746 1914 aa0.66□□□□□ -2.3
SYCP1-206ENST00000477590 CITO14578 2027 aa0.66□□□□□ -2.3
SYCP1-206ENST00000477590 LYRM1O43325 122 aa0.66□□□□□ -2.3
SYCP1-206ENST00000477590 TRGC2P03986 189 aa0.66□□□□□ -2.3
SYCP1-206ENST00000477590 DHRS4L2Q6PKH6 230 aa0.66□□□□□ -2.3
SYCP1-206ENST00000477590 LYRM2Q9NU23 88 aaPredicted RBP0.66□□□□□ -2.3
SYCP1-206ENST00000477590 RNF11Q9Y3C5 154 aa0.66□□□□□ -2.3
SYCP1-206ENST00000477590 CAMSAP1Q5T5Y3 1602 aa0.66□□□□□ -2.3
SYCP1-206ENST00000477590 UBR2Q8IWV8 1755 aa0.65□□□□□ -2.3
SYCP1-206ENST00000477590 K7ERJ3 54 aa0.65□□□□□ -2.31
SYCP1-206ENST00000477590 HIST1H2BKO60814 126 aa0.65□□□□□ -2.31
SYCP1-206ENST00000477590 HIST1H2BJP06899 126 aa0.65□□□□□ -2.31
SYCP1-206ENST00000477590 PPP1R2P41236 205 aa0.65□□□□□ -2.31
SYCP1-206ENST00000477590 MRPS15P82914 257 aaKnown RBP0.65□□□□□ -2.31
SYCP1-206ENST00000477590 EIF3IQ13347 325 aaKnown RBP0.65□□□□□ -2.31
SYCP1-206ENST00000477590 RFX7Q2KHR2 1363 aa0.65□□□□□ -2.31
SYCP1-206ENST00000477590 MUC5BQ9HC84 5762 aaPredicted RBP0.65□□□□□ -2.31
SYCP1-206ENST00000477590 NUPR2A6NF83 97 aa0.64□□□□□ -2.31
SYCP1-206ENST00000477590 CROCCP2Q86T23 111 aa0.64□□□□□ -2.31
SYCP1-206ENST00000477590 OR13C6PQ8NH95 151 aa0.64□□□□□ -2.31
SYCP1-206ENST00000477590 MALSU1Q96EH3 234 aa0.64□□□□□ -2.31
SYCP1-206ENST00000477590 SH3BGRL3Q9H299 93 aa0.64□□□□□ -2.31
SYCP1-206ENST00000477590 NCAPD3P42695 1498 aa0.63□□□□□ -2.31
SYCP1-206ENST00000477590 TRAV5A0A0B4J249 113 aa0.63□□□□□ -2.31
SYCP1-206ENST00000477590 TRBV30A0A0K0K1B3 111 aa0.63□□□□□ -2.31
SYCP1-206ENST00000477590 ODAMA1E959 279 aa0.63□□□□□ -2.31
SYCP1-206ENST00000477590 C9orf170A2RU37 121 aa0.63□□□□□ -2.31
SYCP1-206ENST00000477590 KDELR1P24390 212 aa0.63□□□□□ -2.31
SYCP1-206ENST00000477590 ARF6P62330 175 aa0.63□□□□□ -2.31
SYCP1-206ENST00000477590 MSMO1Q15800 293 aa0.63□□□□□ -2.31
SYCP1-206ENST00000477590 GLIPR1L1Q6UWM5 242 aa0.63□□□□□ -2.31
SYCP1-206ENST00000477590 GPX7Q96SL4 187 aaPredicted RBP0.63□□□□□ -2.31
SYCP1-206ENST00000477590 C5orf67F2Z3F1 127 aa0.62□□□□□ -2.31
SYCP1-206ENST00000477590 GPR31O00270 319 aa0.62□□□□□ -2.31
SYCP1-206ENST00000477590 IFNA1P01562 189 aa0.62□□□□□ -2.31
SYCP1-206ENST00000477590 CD14P08571 375 aa0.62□□□□□ -2.31
SYCP1-206ENST00000477590 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
SYCP1-206ENST00000477590 SS18L2Q9UHA2 77 aa0.62□□□□□ -2.31
SYCP1-206ENST00000477590 BOKQ9UMX3 212 aaPredicted RBP0.62□□□□□ -2.31
SYCP1-206ENST00000477590 NUP210LQ5VU65 1888 aa0.62□□□□□ -2.31
SYCP1-206ENST00000477590 FREM3P0C091 2139 aa0.62□□□□□ -2.31
SYCP1-206ENST00000477590 A0A0D9SG42 100 aa0.61□□□□□ -2.31
SYCP1-206ENST00000477590 SPINT3P49223 89 aa0.61□□□□□ -2.31
SYCP1-206ENST00000477590 RPL19P84098 196 aaKnown RBP0.61□□□□□ -2.31
SYCP1-206ENST00000477590 GINS3Q9BRX5 216 aa0.61□□□□□ -2.31
SYCP1-206ENST00000477590 STOML2Q9UJZ1 356 aa0.61□□□□□ -2.31
SYCP1-206ENST00000477590 TET1Q8NFU7 2136 aa0.61□□□□□ -2.31
SYCP1-206ENST00000477590 CAMSAP2Q08AD1 1489 aa0.61□□□□□ -2.31
SYCP1-206ENST00000477590 ZNF462Q96JM2 2506 aa0.6□□□□□ -2.31
SYCP1-206ENST00000477590 ZNF727A8MUV8 499 aa0.6□□□□□ -2.31
SYCP1-206ENST00000477590 K7EIL1 84 aa0.6□□□□□ -2.31
SYCP1-206ENST00000477590 IDO1P14902 403 aa0.6□□□□□ -2.31
SYCP1-206ENST00000477590 FOXA3P55318 350 aaPredicted RBP0.6□□□□□ -2.31
SYCP1-206ENST00000477590 FXYD6P3P58550 94 aa0.6□□□□□ -2.31
SYCP1-206ENST00000477590 Q6ZS92 163 aa0.6□□□□□ -2.31
SYCP1-206ENST00000477590 FAM216BQ8N7L0 139 aa0.6□□□□□ -2.31
SYCP1-206ENST00000477590 NEK7Q8TDX7 302 aa0.6□□□□□ -2.31
SYCP1-206ENST00000477590 COL24A1Q17RW2 1714 aa0.6□□□□□ -2.31
SYCP1-206ENST00000477590 ERBINQ96RT1 1412 aa0.59□□□□□ -2.31
SYCP1-206ENST00000477590 ZNF137PP52743 207 aa0.59□□□□□ -2.31
SYCP1-206ENST00000477590 HBBP68871 147 aa0.59□□□□□ -2.31
SYCP1-206ENST00000477590 BASP1P80723 227 aaKnown RBP0.59□□□□□ -2.31
SYCP1-206ENST00000477590 OCIAD2Q56VL3 154 aa0.59□□□□□ -2.31
SYCP1-206ENST00000477590 C1orf140Q5VVS0 124 aa0.59□□□□□ -2.31
SYCP1-206ENST00000477590 ATOH7Q8N100 152 aa0.59□□□□□ -2.31
SYCP1-206ENST00000477590 FANCMQ8IYD8 2048 aa0.59□□□□□ -2.32
SYCP1-206ENST00000477590 CST7O76096 145 aa0.58□□□□□ -2.32
SYCP1-206ENST00000477590 FXYD4P59646 89 aa0.58□□□□□ -2.32
SYCP1-206ENST00000477590 VMA21Q3ZAQ7 101 aa0.58□□□□□ -2.32
SYCP1-206ENST00000477590 C6orf52Q5T4I8 152 aa0.58□□□□□ -2.32
SYCP1-206ENST00000477590 Q6ZQY7 126 aa0.58□□□□□ -2.32
SYCP1-206ENST00000477590 LINC00299Q6ZSB3 139 aa0.58□□□□□ -2.32
SYCP1-206ENST00000477590 TMED4Q7Z7H5 227 aa0.58□□□□□ -2.32
SYCP1-206ENST00000477590 Q86TA4 180 aa0.58□□□□□ -2.32
SYCP1-206ENST00000477590 RPL35P42766 123 aaKnown RBP0.57□□□□□ -2.32
SYCP1-206ENST00000477590 SPINK7P58062 85 aa0.57□□□□□ -2.32
SYCP1-206ENST00000477590 MIR22HGQ0VDD5 57 aa0.57□□□□□ -2.32
SYCP1-206ENST00000477590 NUP35Q8NFH5 326 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms