RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 H3BTX0 84 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 SOCS3O14543 225 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 OR10J4P0C629 311 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 ARL14EPLP0DKL9 152 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 SSX7Q7RTT5 188 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 FAM213BQ8TBF2 198 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 C16orf92Q96LL3 132 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 C17orf77Q96MU5 243 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 WFDC10AQ9H1F0 79 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 OR51M1Q9H341 326 aa11.43□□□□□ -0.58
SEC13-215ENST00000477547 H3BQ15 152 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 ISLRO14498 428 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 PSMB3P49720 205 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 SNRPD3P62318 126 aaKnown RBP11.42□□□□□ -0.58
SEC13-215ENST00000477547 ZNF726P1Q15940 193 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 PQLC2Q6ZP29 291 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 LRRC20Q8TCA0 184 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 ZNF503Q96F45 646 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 SLC50A1Q9BRV3 221 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 HRH4Q9H3N8 390 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
SEC13-215ENST00000477547 OR11H12B2RN74 326 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 SLC17A3O00476 420 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 STAG3L2P0CL84 134 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 STAG3L3P0CL85 134 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 HIST1H1EP10412 219 aaKnown RBP11.41□□□□□ -0.58
SEC13-215ENST00000477547 ID1P41134 155 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 FHITP49789 147 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 GUK1Q16774 197 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 PSMG4Q5JS54 123 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 MRAPQ8TCY5 172 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 BLNKQ8WV28 456 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 FXYD5Q96DB9 178 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 ZNF586Q9NXT0 402 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 AGRNO00468 2067 aa11.41□□□□□ -0.58
SEC13-215ENST00000477547 MAP1LC3B2A6NCE7 125 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 DEFB131AP59861 70 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 FAM74A1Q5RGS3 127 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 ALKAL2Q6UX46 152 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 DPPA3Q6W0C5 159 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 IQCF2Q8IXL9 164 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 RNF141Q8WVD5 230 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 PHYHIPLQ96FC7 376 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 FAM110AQ9BQ89 295 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 MAP1LC3BQ9GZQ8 125 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 DNAH3Q8TD57 4116 aa11.4□□□□□ -0.58
SEC13-215ENST00000477547 TRBV19A0A075B6N1 114 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 TRAV8-2A0A0B4J237 113 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 ZNF253O75346 499 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 CXorf1O96002 111 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 SULT1A2P50226 295 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 RAB5CP51148 216 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 CMC4P56277 68 aaPredicted RBP11.39□□□□□ -0.59
SEC13-215ENST00000477547 PDE6HQ13956 83 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 Q8N1Y9 231 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 RNF182Q8N6D2 247 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 LINC00052Q96N35 136 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 ZNF331Q9NQX6 463 aaPredicted RBP11.39□□□□□ -0.59
SEC13-215ENST00000477547 C19orf73Q9NVV2 129 aa11.39□□□□□ -0.59
SEC13-215ENST00000477547 K7EIL1 84 aa11.38□□□□□ -0.59
SEC13-215ENST00000477547 NBEAP1P0C6P0 100 aa11.38□□□□□ -0.59
SEC13-215ENST00000477547 GCHFRP30047 84 aa11.38□□□□□ -0.59
SEC13-215ENST00000477547 FGF8P55075 233 aaPredicted RBP11.38□□□□□ -0.59
SEC13-215ENST00000477547 IGFL4Q6B9Z1 124 aa11.38□□□□□ -0.59
SEC13-215ENST00000477547 APRG1Q8IVJ8 170 aa11.38□□□□□ -0.59
SEC13-215ENST00000477547 DEFB125Q8N687 156 aa11.38□□□□□ -0.59
SEC13-215ENST00000477547 NDUFB4O95168 129 aa11.37□□□□□ -0.59
SEC13-215ENST00000477547 HLA-DMBP28068 263 aa11.37□□□□□ -0.59
SEC13-215ENST00000477547 ZNF124Q15973 351 aa11.37□□□□□ -0.59
SEC13-215ENST00000477547 ZNF738Q8NE65 137 aa11.37□□□□□ -0.59
SEC13-215ENST00000477547 SAT2Q96F10 170 aaPredicted RBP11.37□□□□□ -0.59
SEC13-215ENST00000477547 C20orf173Q96LM9 149 aa11.37□□□□□ -0.59
SEC13-215ENST00000477547 SRD5A3Q9H8P0 318 aa11.37□□□□□ -0.59
SEC13-215ENST00000477547 A0A1B0GV50 99 aa11.36□□□□□ -0.59
SEC13-215ENST00000477547 IGHV4-30-4P0DP06 118 aa11.36□□□□□ -0.59
SEC13-215ENST00000477547 PSG9Q00887 426 aa11.36□□□□□ -0.59
SEC13-215ENST00000477547 AAMDCQ9H7C9 122 aa11.36□□□□□ -0.59
SEC13-215ENST00000477547 TMEM167BQ9NRX6 74 aa11.36□□□□□ -0.59
SEC13-215ENST00000477547 H2AFB1P0C5Y9 115 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 DEFB1P60022 68 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 PSG3Q16557 428 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 EXOC3-AS1Q8N2X6 119 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 SFT2D1Q8WV19 159 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 TUBA4BQ9H853 241 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 KNCNA6PVL3 124 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 ZNF705EA8MWA4 302 aaPredicted RBP11.35□□□□□ -0.59
SEC13-215ENST00000477547 ICAM4Q14773 271 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 ACTL10Q5JWF8 245 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 MBD3L1Q8WWY6 194 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 CITED4Q96RK1 184 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 Q9H3A6 140 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 TMPRSS5Q9H3S3 457 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 CLEC5AQ9NY25 188 aa11.35□□□□□ -0.59
SEC13-215ENST00000477547 COL7A1Q02388 2944 aa11.34□□□□□ -0.59
SEC13-215ENST00000477547 F6UB75 175 aa11.34□□□□□ -0.59
SEC13-215ENST00000477547 M0R3E3 92 aa11.34□□□□□ -0.59
SEC13-215ENST00000477547 RANP62826 216 aaKnown RBP11.34□□□□□ -0.59
SEC13-215ENST00000477547 FOXI2Q6ZQN5 318 aa11.34□□□□□ -0.59
SEC13-215ENST00000477547 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
SEC13-215ENST00000477547 MRPL53Q96EL3 112 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms