RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 SLC50A1Q9BRV3 221 aa9.7□□□□□ -0.86
TOP3A-205ENST00000477508 FUT9Q9Y231 359 aa9.7□□□□□ -0.86
TOP3A-205ENST00000477508 TRAV5A0A0B4J249 113 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 ZNF253O75346 499 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 HIST1H1EP10412 219 aaKnown RBP9.69□□□□□ -0.86
TOP3A-205ENST00000477508 ATP6V0CP27449 155 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 ZNF124Q15973 351 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 TMEM41BQ5BJD5 291 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 ACTL10Q5JWF8 245 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 RPL7L1Q6DKI1 246 aaKnown RBP9.69□□□□□ -0.86
TOP3A-205ENST00000477508 EBLN2Q6P2I7 272 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 MORN3Q6PF18 240 aaPredicted RBP9.69□□□□□ -0.86
TOP3A-205ENST00000477508 FOXI2Q6ZQN5 318 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 Q6ZWC4 215 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 AKAP14Q86UN6 197 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 OR11H4Q8NGC9 324 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 C17orf77Q96MU5 243 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 ARPC5LQ9BPX5 153 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 CSTL1Q9H114 145 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 DNAH9Q9NYC9 4486 aa9.69□□□□□ -0.86
TOP3A-205ENST00000477508 hCG_2014768A0A024R1R8 64 aa9.68□□□□□ -0.86
TOP3A-205ENST00000477508 A0A1W2PPV4 95 aa9.68□□□□□ -0.86
TOP3A-205ENST00000477508 SPP1P10451 314 aa9.68□□□□□ -0.86
TOP3A-205ENST00000477508 RPL35AP18077 110 aaKnown RBP9.68□□□□□ -0.86
TOP3A-205ENST00000477508 NUTF2P61970 127 aaKnown RBP9.68□□□□□ -0.86
TOP3A-205ENST00000477508 EIF5AP63241 154 aaKnown RBP9.68□□□□□ -0.86
TOP3A-205ENST00000477508 PDE6HQ13956 83 aa9.68□□□□□ -0.86
TOP3A-205ENST00000477508 MIR17HGQ75NE6 70 aa9.68□□□□□ -0.86
TOP3A-205ENST00000477508 TRPT1Q86TN4 253 aaKnown RBP9.68□□□□□ -0.86
TOP3A-205ENST00000477508 FAM167A-AS1Q96KT0 104 aa9.68□□□□□ -0.86
TOP3A-205ENST00000477508 CLUHP3Q96NS8 147 aa9.68□□□□□ -0.86
TOP3A-205ENST00000477508 OR51M1Q9H341 326 aa9.68□□□□□ -0.86
TOP3A-205ENST00000477508 SAV1Q9H4B6 383 aaPredicted RBP9.68□□□□□ -0.86
TOP3A-205ENST00000477508 ZNF331Q9NQX6 463 aaPredicted RBP9.68□□□□□ -0.86
TOP3A-205ENST00000477508 TP53TG1Q9Y2A0 90 aa9.68□□□□□ -0.86
TOP3A-205ENST00000477508 KANTRA0A1W2PQU2 76 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 KNCNA6PVL3 124 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 H3BMM0 161 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 H3BQ15 152 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 C1QBP02746 253 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 HLA-DRB4P13762 266 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 PSG3Q16557 428 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 KHDC3LQ587J8 217 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 OR10G4Q8NGN3 311 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 OR10G9Q8NGN4 311 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 OR10G7Q8NGN6 311 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 HYLS1Q96M11 299 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 SLC25A2Q9BXI2 301 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 U3KQK5 164 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 HLA-DRB4X5D2U9 266 aa9.67□□□□□ -0.86
TOP3A-205ENST00000477508 COL7A1Q02388 2944 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 TRBV19A0A075B6N1 114 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 TRAV8-2A0A0B4J237 113 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 OR7C2O60412 319 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 DUSP14O95147 198 aaKnown RBP9.66□□□□□ -0.86
TOP3A-205ENST00000477508 NBEAP1P0C6P0 100 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 PSG9Q00887 426 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 PQLC2Q6ZP29 291 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 ZNF738Q8NE65 137 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 SAT2Q96F10 170 aaPredicted RBP9.66□□□□□ -0.86
TOP3A-205ENST00000477508 PAXXQ9BUH6 204 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 CYTL1Q9NRR1 136 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 ZNF586Q9NXT0 402 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 PRELID1Q9Y255 219 aa9.66□□□□□ -0.86
TOP3A-205ENST00000477508 AGRNO00468 2067 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 A0A0J9YX75 114 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 BCL2L11O43521 198 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 PFDN1O60925 122 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 RAB2AP61019 212 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 RNF141Q8WVD5 230 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 C20orf173Q96LM9 149 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 RCHY1Q96PM5 261 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 SH3BGRL3Q9H299 93 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 AAMDCQ9H7C9 122 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 RFNGQ9Y644 331 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 NBEAL2Q6ZNJ1 2754 aa9.65□□□□□ -0.86
TOP3A-205ENST00000477508 CA1P00915 261 aaPredicted RBP9.64□□□□□ -0.87
TOP3A-205ENST00000477508 PYYP10082 97 aa9.64□□□□□ -0.87
TOP3A-205ENST00000477508 C4BPBP20851 252 aa9.64□□□□□ -0.87
TOP3A-205ENST00000477508 CDC34P49427 236 aaPredicted RBP9.64□□□□□ -0.87
TOP3A-205ENST00000477508 FAM122CQ6P4D5 195 aa9.64□□□□□ -0.87
TOP3A-205ENST00000477508 TMUB2Q71RG4 321 aa9.64□□□□□ -0.87
TOP3A-205ENST00000477508 LYPD1Q8N2G4 141 aa9.64□□□□□ -0.87
TOP3A-205ENST00000477508 RPP25LQ8N5L8 163 aaKnown RBP9.64□□□□□ -0.87
TOP3A-205ENST00000477508 RNF182Q8N6D2 247 aa9.64□□□□□ -0.87
TOP3A-205ENST00000477508 FXYD5Q96DB9 178 aa9.64□□□□□ -0.87
TOP3A-205ENST00000477508 MRPL53Q96EL3 112 aaKnown RBP9.64□□□□□ -0.87
TOP3A-205ENST00000477508 ZNF471Q9BX82 626 aaPredicted RBP9.64□□□□□ -0.87
TOP3A-205ENST00000477508 ACTR3CQ9C0K3 210 aaPredicted RBP9.64□□□□□ -0.87
TOP3A-205ENST00000477508 SPRY2O43597 315 aa9.63□□□□□ -0.87
TOP3A-205ENST00000477508 SNRPCP09234 159 aaKnown RBP9.63□□□□□ -0.87
TOP3A-205ENST00000477508 UBE2L3P68036 154 aaKnown RBP9.63□□□□□ -0.87
TOP3A-205ENST00000477508 AKR1C8PQ5T2L2 129 aa9.63□□□□□ -0.87
TOP3A-205ENST00000477508 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
TOP3A-205ENST00000477508 IGFL4Q6B9Z1 124 aa9.63□□□□□ -0.87
TOP3A-205ENST00000477508 OR4B1Q8NGF8 309 aa9.63□□□□□ -0.87
TOP3A-205ENST00000477508 OR8A1Q8NGG7 326 aa9.63□□□□□ -0.87
TOP3A-205ENST00000477508 BLNKQ8WV28 456 aa9.63□□□□□ -0.87
TOP3A-205ENST00000477508 RPUSD4Q96CM3 377 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms