RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SAPCD1Q5SSQ6 148 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 NIT1Q86X76 327 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 PRELID3AQ96N28 172 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 TMEM208Q9BTX3 173 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 PRDM13Q9H4Q3 707 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 MTORP42345 2549 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 TRAV9-1A0A075B6T8 112 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 GPX1P07203 203 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 OR10J6PQ8NGY7 276 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 OR10AG1Q8NH19 301 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 DDB2Q92466 427 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 GOLT1BQ9Y3E0 138 aa8.84□□□□□ -0.99
COL27A1-204ENST00000477421 PVRIGQ6DKI7 326 aa8.83□□□□□ -1
COL27A1-204ENST00000477421 SLC25A2Q9BXI2 301 aa8.83□□□□□ -1
COL27A1-204ENST00000477421 CENPEQ02224 2701 aa8.83□□□□□ -1
COL27A1-204ENST00000477421 FBLL1A6NHQ2 334 aaKnown RBP8.83□□□□□ -1
COL27A1-204ENST00000477421 NCR2O95944 276 aa8.83□□□□□ -1
COL27A1-204ENST00000477421 TGFAP01135 160 aa8.83□□□□□ -1
COL27A1-204ENST00000477421 MRPL36Q9P0J6 103 aaKnown RBP8.83□□□□□ -1
COL27A1-204ENST00000477421 MAP1AP78559 2803 aaPredicted RBP8.83□□□□□ -1
COL27A1-204ENST00000477421 A6NNC1 897 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 G3V318 75 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 SAA4P35542 130 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 GUSBP1Q15486 140 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 VWC2Q2TAL6 325 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 FAM74A4Q5TZK3 123 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 RAB37Q96AX2 223 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 SPXQ9BT56 116 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 PHLDA3Q9Y5J5 127 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 V9GYV3 84 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 NBEAQ8NFP9 2946 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 C3orf79P0CE67 100 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 FBLN7Q53RD9 439 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 SLC25A34Q6PIV7 304 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 FER1L6-AS1Q8NA97 138 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 C17orf77Q96MU5 243 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 DUX5Q96PT3 197 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 NUPR1O60356 82 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 IGHV2-70P01814 119 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 LINC00614P0C842 121 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 PRTN3P24158 256 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 NBL1P41271 181 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 SLAQ13239 276 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 POU2AF1Q16633 256 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 Q8NA96 180 aa8.82□□□□□ -1
COL27A1-204ENST00000477421 CITED2Q99967 270 aaPredicted RBP8.82□□□□□ -1
COL27A1-204ENST00000477421 NUDT3O95989 172 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 MAPK1IP1LQ8NDC0 245 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 C7orf71A4D174 169 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 EVI2AP22794 236 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 MYOZ3Q8TDC0 251 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 COL25A1Q9BXS0 654 aaPredicted RBP8.81□□□□□ -1
COL27A1-204ENST00000477421 KMT2EQ8IZD2 1858 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 DSCAMO60469 2012 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 IGLC7A0M8Q6 106 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 NDUFB8O95169 186 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 FAM71F2Q6NXP2 309 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 MIEN1Q9BRT3 115 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 MAP1LC3AQ9H492 121 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 CPAMD8Q8IZJ3 1885 aa8.81□□□□□ -1
COL27A1-204ENST00000477421 P0C879 139 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 EFNA4P52798 201 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 RUSC1-AS1Q66K80 236 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 FNDC10F2Z333 226 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 C3orf36Q3SXR2 165 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 FRYQ5TBA9 3013 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 ARMS2P0C7Q2 107 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 SCGB1D4Q6XE38 83 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 ORMDL3Q8N138 153 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 RCHY1Q96PM5 261 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 ZFP30Q9Y2G7 519 aa8.8□□□□□ -1
COL27A1-204ENST00000477421 KLF2Q9Y5W3 355 aaPredicted RBP8.8□□□□□ -1
COL27A1-204ENST00000477421 FABP5P3A8MUU1 101 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 SMKR1H3BMG3 65 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 LYZL1Q6UWQ5 148 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 Q6ZWC4 215 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 ZNF502Q8TBZ5 544 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 EREGO14944 169 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 TYMSP04818 313 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 PATE2Q6UY27 113 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 FXYD5Q96DB9 178 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 LY96Q9Y6Y9 160 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 IGHV3OR16-12A0A075B7B8 117 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 A0A1W2PS18 150 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 H3BUX3 64 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 IGLC1P0CG04 106 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 COX6B1P14854 86 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 OR10J3Q5JRS4 329 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 RNF182Q8N6D2 247 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 BEND2Q8NDZ0 799 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 LAMTOR2Q9Y2Q5 125 aa8.79□□□□□ -1
COL27A1-204ENST00000477421 POLR3KQ9Y2Y1 108 aaPredicted RBP8.79□□□□□ -1
COL27A1-204ENST00000477421 CGB3P0DN86 165 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 CGB7P0DN87 165 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 C1orf194Q5T5A4 169 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 ZNF562Q6V9R5 426 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 hDV102S1A0JD36 115 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 GCSHP23434 173 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 ERCC8Q13216 396 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 FAM106AQ4KMX7 169 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms