RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 HSD17B11Q8NBQ5 300 aa9.08□□□□□ -0.96
CLCNKA-205ENST00000477360 TMEM37Q8WXS4 190 aa9.08□□□□□ -0.96
CLCNKA-205ENST00000477360 SLC25A32Q9H2D1 315 aa9.08□□□□□ -0.96
CLCNKA-205ENST00000477360 DNAJC4Q9NNZ3 241 aa9.08□□□□□ -0.96
CLCNKA-205ENST00000477360 CLEC5AQ9NY25 188 aa9.08□□□□□ -0.96
CLCNKA-205ENST00000477360 HLA-DRB4X5D2U9 266 aa9.08□□□□□ -0.96
CLCNKA-205ENST00000477360 OR5G3P0C626 314 aa9.07□□□□□ -0.96
CLCNKA-205ENST00000477360 SEC11BP0C7V7 166 aa9.07□□□□□ -0.96
CLCNKA-205ENST00000477360 RPL35AP18077 110 aaKnown RBP9.07□□□□□ -0.96
CLCNKA-205ENST00000477360 LEMD1Q68G75 181 aa9.07□□□□□ -0.96
CLCNKA-205ENST00000477360 SLC51BQ86UW2 128 aa9.07□□□□□ -0.96
CLCNKA-205ENST00000477360 ZNF471Q9BX82 626 aaPredicted RBP9.07□□□□□ -0.96
CLCNKA-205ENST00000477360 SAV1Q9H4B6 383 aaPredicted RBP9.07□□□□□ -0.96
CLCNKA-205ENST00000477360 RPRMQ9NS64 109 aa9.07□□□□□ -0.96
CLCNKA-205ENST00000477360 DNAH7Q8WXX0 4024 aa9.07□□□□□ -0.96
CLCNKA-205ENST00000477360 H3BMM0 161 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 COX7A2P2O60397 106 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 MBP02144 154 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 TPT1P13693 172 aaKnown RBP9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 M6PRP20645 277 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 ZNF124Q15973 351 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 GUK1Q16774 197 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 DEFB135Q30KP9 77 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 ACOT6Q3I5F7 207 aaPredicted RBP9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 FFAR4Q5NUL3 377 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 C10orf113Q5VZT2 155 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 BPIFA4PQ86YQ2 179 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 BAP18Q8IXM2 172 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 SCRT1Q9BWW7 348 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 MRPL32Q9BYC8 188 aaKnown RBP9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 SLC25A22Q9H936 323 aa9.06□□□□□ -0.96
CLCNKA-205ENST00000477360 A8MTW9 85 aa9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 MRPS12O15235 138 aaKnown RBP9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 CA1P00915 261 aaPredicted RBP9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 ACTL10Q5JWF8 245 aa9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 LCN15Q6UWW0 184 aa9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 LINC00305Q7Z4B0 112 aa9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 C16orf92Q96LL3 132 aa9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 C17orf77Q96MU5 243 aa9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 SLC50A1Q9BRV3 221 aa9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 C11orf68Q9H3H3 251 aaKnown RBP9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 DOK5Q9P104 306 aa9.05□□□□□ -0.96
CLCNKA-205ENST00000477360 ZNF253O75346 499 aa9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 NKX2-5P52952 324 aaPredicted RBP9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 EIF5AL1Q6IS14 154 aaKnown RBP9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 EBLN2Q6P2I7 272 aa9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 UHRF2Q96PU4 802 aa9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 SH3BGRL3Q9H299 93 aa9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 HRH4Q9H3N8 390 aa9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 RETNQ9HD89 108 aa9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 TMEM14CQ9P0S9 112 aa9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 RFNGQ9Y644 331 aa9.04□□□□□ -0.96
CLCNKA-205ENST00000477360 A0A0J9YX75 114 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 ZNF705EA8MWA4 302 aaPredicted RBP9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 UMAD1C9J7I0 102 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 DUSP14O95147 198 aaKnown RBP9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 GIG44P09565 113 aaPredicted RBP9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 RHOBP62745 196 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 GCSAMLQ5JQS6 135 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 FAM78BQ5VT40 261 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 CSNK1G2-AS1Q8NCQ2 148 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 PHYHIPLQ96FC7 376 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 LINC00052Q96N35 136 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 RARRES2Q99969 163 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 FUT9Q9Y231 359 aa9.03□□□□□ -0.96
CLCNKA-205ENST00000477360 KNCNA6PVL3 124 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 BOLA2-SMG1P6H3BVE0 249 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 AMBPP02760 352 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 IGLC2P0DOY2 106 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 MIFP14174 115 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 PDE6HQ13956 83 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 MORN5Q5VZ52 161 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 RPP25LQ8N5L8 163 aaKnown RBP9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 OR10G4Q8NGN3 311 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 OR10G9Q8NGN4 311 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 OR10G7Q8NGN6 311 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 FAM167A-AS1Q96KT0 104 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 NEU1Q99519 415 aa9.02□□□□□ -0.97
CLCNKA-205ENST00000477360 TRAV8-2A0A0B4J237 113 aa9.01□□□□□ -0.97
CLCNKA-205ENST00000477360 RAB2AP61019 212 aa9.01□□□□□ -0.97
CLCNKA-205ENST00000477360 AKR1C8PQ5T2L2 129 aa9.01□□□□□ -0.97
CLCNKA-205ENST00000477360 DPPA3Q6W0C5 159 aa9.01□□□□□ -0.97
CLCNKA-205ENST00000477360 OR11H2Q8NH07 326 aa9.01□□□□□ -0.97
CLCNKA-205ENST00000477360 ZNF331Q9NQX6 463 aaPredicted RBP9.01□□□□□ -0.97
CLCNKA-205ENST00000477360 A0A1W2PPV4 95 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 SMIM9A6NGZ8 99 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 CDC34P49427 236 aaPredicted RBP9□□□□□ -0.97
CLCNKA-205ENST00000477360 RAB5CP51148 216 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 TAS2R45P59539 299 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 PSG9Q00887 426 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 PSG3Q16557 428 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 KHDC3LQ587J8 217 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 PQLC2Q6ZP29 291 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 MIR17HGQ75NE6 70 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 LRRC20Q8TCA0 184 aa9□□□□□ -0.97
CLCNKA-205ENST00000477360 MRPL53Q96EL3 112 aaKnown RBP9□□□□□ -0.97
CLCNKA-205ENST00000477360 ACTR3CQ9C0K3 210 aaPredicted RBP9□□□□□ -0.97
CLCNKA-205ENST00000477360 PLA2G2EQ9NZK7 142 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms