RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 MIR17HGQ75NE6 70 aa12.69□□□□□ -0.38
SMARCD3-210ENST00000477169 BPIFA4PQ86YQ2 179 aa12.69□□□□□ -0.38
SMARCD3-210ENST00000477169 APRG1Q8IVJ8 170 aa12.69□□□□□ -0.38
SMARCD3-210ENST00000477169 OR2G3Q8NGZ4 309 aa12.69□□□□□ -0.38
SMARCD3-210ENST00000477169 A0A087X0K7 114 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 KIR2DL5BA0A0G2JN68 375 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 KIR2DL5BA0A0G2JPC4 375 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 MEOX2P50222 304 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 ZNF124Q15973 351 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 ACOT6Q3I5F7 207 aaPredicted RBP12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 TMUB2Q71RG4 321 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 KIR2DL5AQ8N109 375 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 KIR2DL5BQ8NHK3 375 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 GNPNAT1Q96EK6 184 aaPredicted RBP12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 FAM167A-AS1Q96KT0 104 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 MRPL32Q9BYC8 188 aaKnown RBP12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 FUT9Q9Y231 359 aa12.68□□□□□ -0.38
SMARCD3-210ENST00000477169 BCL2L11O43521 198 aa12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 SPRY2O43597 315 aa12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 M6PRP20645 277 aa12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 PSMB3P49720 205 aa12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 RAB2AP61019 212 aa12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 SNRPD3P62318 126 aaKnown RBP12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 LGALSLQ3ZCW2 172 aaPredicted RBP12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 PSMG4Q5JS54 123 aa12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 HYLS1Q96M11 299 aa12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 SLC25A2Q9BXI2 301 aa12.67□□□□□ -0.38
SMARCD3-210ENST00000477169 KANTRA0A1W2PQU2 76 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 H3BQ15 152 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 ISLRO14498 428 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 SNRPCP09234 159 aaKnown RBP12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 IGLC2P0DOY2 106 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 ID1P41134 155 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 RHOBP62745 196 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 SERF2P84101 59 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 TMEM14CQ9P0S9 112 aa12.66□□□□□ -0.38
SMARCD3-210ENST00000477169 TRAV8-2A0A0B4J237 113 aa12.65□□□□□ -0.38
SMARCD3-210ENST00000477169 OR10G4Q8NGN3 311 aa12.65□□□□□ -0.38
SMARCD3-210ENST00000477169 OR10G9Q8NGN4 311 aa12.65□□□□□ -0.38
SMARCD3-210ENST00000477169 OR10G7Q8NGN6 311 aa12.65□□□□□ -0.38
SMARCD3-210ENST00000477169 RNF183Q96D59 192 aa12.65□□□□□ -0.38
SMARCD3-210ENST00000477169 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
SMARCD3-210ENST00000477169 HRH4Q9H3N8 390 aa12.65□□□□□ -0.38
SMARCD3-210ENST00000477169 H3BTX0 84 aa12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 PFDN1O60925 122 aa12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 PYYP10082 97 aa12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 DEFB135Q30KP9 77 aa12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 ZFP69Q49AA0 526 aa12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 IGFL4Q6B9Z1 124 aa12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 FAM122CQ6P4D5 195 aa12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 LINC00052Q96N35 136 aa12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 ZNF471Q9BX82 626 aaPredicted RBP12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 ZNF586Q9NXT0 402 aa12.64□□□□□ -0.39
SMARCD3-210ENST00000477169 KNCNA6PVL3 124 aa12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 MBP02144 154 aa12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 HIST1H1EP10412 219 aaKnown RBP12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 SPP1P10451 314 aa12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 RPL35AP18077 110 aaKnown RBP12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 LCN15Q6UWW0 184 aa12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 RPP25LQ8N5L8 163 aaKnown RBP12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 SAT2Q96F10 170 aaPredicted RBP12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 ZNF503Q96F45 646 aa12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 OR51M1Q9H341 326 aa12.63□□□□□ -0.39
SMARCD3-210ENST00000477169 A0A0J9YWU9 116 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 SLC17A3O00476 420 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 HLA-DMBP28068 263 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 DEFB1P60022 68 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 GUK1Q16774 197 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 TMEM41BQ5BJD5 291 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 C9orf62Q8N4C0 152 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 RNF182Q8N6D2 247 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 LRRC20Q8TCA0 184 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 PAXXQ9BUH6 204 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 CSTL1Q9H114 145 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 ZNF331Q9NQX6 463 aaPredicted RBP12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 RPRMQ9NS64 109 aa12.62□□□□□ -0.39
SMARCD3-210ENST00000477169 EPPK1P58107 5090 aaKnown RBP12.61□□□□□ -0.39
SMARCD3-210ENST00000477169 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
SMARCD3-210ENST00000477169 OR7C2O60412 319 aa12.61□□□□□ -0.39
SMARCD3-210ENST00000477169 TAS2R45P59539 299 aa12.61□□□□□ -0.39
SMARCD3-210ENST00000477169 KHDC3LQ587J8 217 aa12.61□□□□□ -0.39
SMARCD3-210ENST00000477169 ACTL10Q5JWF8 245 aa12.61□□□□□ -0.39
SMARCD3-210ENST00000477169 RNF141Q8WVD5 230 aa12.61□□□□□ -0.39
SMARCD3-210ENST00000477169 FXYD5Q96DB9 178 aa12.61□□□□□ -0.39
SMARCD3-210ENST00000477169 SLC50A1Q9BRV3 221 aa12.61□□□□□ -0.39
SMARCD3-210ENST00000477169 AGRNO00468 2067 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 ZNF253O75346 499 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 NDUFB4O95168 129 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 OR10J4P0C629 311 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 NBEAP1P0C6P0 100 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 CDC34P49427 236 aaPredicted RBP12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 EIF5AP63241 154 aaKnown RBP12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 PSG3Q16557 428 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 STHQ8IWL8 128 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 BAP18Q8IXM2 172 aa12.6□□□□□ -0.39
SMARCD3-210ENST00000477169 STOML3Q8TAV4 291 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms