RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TMEM128Q5BJH2 165 aa5.16□□□□□ -1.58
BRCA1-214ENST00000477152 LRRC20Q8TCA0 184 aa5.16□□□□□ -1.58
BRCA1-214ENST00000477152 RAB2BQ8WUD1 216 aa5.16□□□□□ -1.58
BRCA1-214ENST00000477152 MRPS26Q9BYN8 205 aaKnown RBP5.16□□□□□ -1.58
BRCA1-214ENST00000477152 MSRB1Q9NZV6 116 aa5.16□□□□□ -1.58
BRCA1-214ENST00000477152 IGLV2-18A0A075B6J9 118 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 RPL7P18124 248 aaKnown RBP5.15□□□□□ -1.58
BRCA1-214ENST00000477152 TSPOP30536 169 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 TNFSF8P32971 234 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 ZNF90Q03938 601 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 AKR1C1Q04828 323 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 OR2F1Q13607 317 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 FAAP20Q6NZ36 180 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 LYZL2Q7Z4W2 148 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 THAP8Q8NA92 274 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 SLC25A21Q9BQT8 299 aaPredicted RBP5.15□□□□□ -1.58
BRCA1-214ENST00000477152 SLC25A22Q9H936 323 aa5.15□□□□□ -1.58
BRCA1-214ENST00000477152 CCDC59Q9P031 241 aaKnown RBP5.15□□□□□ -1.58
BRCA1-214ENST00000477152 FABP12A6NFH5 140 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 ZNF98A6NK75 572 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 WRBO00258 174 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 RTL8CO15255 209 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 ATP5G1P05496 136 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 ATP5G3P48201 142 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 SELENOTP62341 195 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 CLINT1Q14677 625 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 PIK3CD-AS1Q5SR53 167 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 GDF5OSQ5U4N7 250 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 ZNF709Q8N972 641 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 OR10J6PQ8NGY7 276 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 TMEM170AQ8WVE7 144 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 RSG1Q9BU20 258 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 SLC35B3Q9H1N7 401 aa5.15□□□□□ -1.59
BRCA1-214ENST00000477152 STRAPQ9Y3F4 350 aaKnown RBP5.15□□□□□ -1.59
BRCA1-214ENST00000477152 SOCS3O14543 225 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 CTDSP2O14595 271 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 SYNGR2O43760 224 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 SCGB1D1O95968 90 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 ORM2P19652 201 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 RHOBP62745 196 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 FGL1Q08830 312 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 Q6ZR54 194 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 TMED4Q7Z7H5 227 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 TOMM5Q8N4H5 51 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 LRTM2Q8N967 370 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 ZNF738Q8NE65 137 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 C16orf74Q96GX8 76 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 MIXL1Q9H2W2 232 aa5.14□□□□□ -1.59
BRCA1-214ENST00000477152 F5H768 121 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 IL5P05113 134 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 IAPPP10997 89 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 TMBIM6P55061 237 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 TTC32Q5I0X7 151 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 PXDC1Q5TGL8 231 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 ZNF493Q6ZR52 646 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 C1orf158Q8N1D5 194 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 LINC01587Q99440 93 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 C20orf144Q9BQM9 153 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 HIGD1AQ9Y241 93 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 IGKV1D-37A0A075B6S9 117 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 SMCO3A2RU48 225 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 A8MTW9 85 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 BOLA2-SMG1P6H3BVE0 249 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 HYPMO75409 117 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 DEFB130BP0DP73 79 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 DEFB130AP0DP74 79 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 S100A5P33763 92 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 INPP1P49441 399 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 CNN1P51911 297 aaKnown RBP5.13□□□□□ -1.59
BRCA1-214ENST00000477152 TAS2R60P59551 318 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 UBE2MP61081 183 aaKnown RBP5.13□□□□□ -1.59
BRCA1-214ENST00000477152 SPANXN5Q5MJ07 72 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 TMEM144Q7Z5S9 345 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 C6orf223Q8N319 242 aa5.13□□□□□ -1.59
BRCA1-214ENST00000477152 NAA50Q9GZZ1 169 aaKnown RBP5.13□□□□□ -1.59
BRCA1-214ENST00000477152 TIMM8BQ9Y5J9 83 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-214ENST00000477152 C16orf90A8MZG2 172 aa5.12□□□□□ -1.59
BRCA1-214ENST00000477152 F6UB75 175 aa5.12□□□□□ -1.59
BRCA1-214ENST00000477152 PAGE4O60829 102 aa5.12□□□□□ -1.59
BRCA1-214ENST00000477152 PITX3O75364 302 aa5.12□□□□□ -1.59
BRCA1-214ENST00000477152 CXCL2P19875 107 aa5.12□□□□□ -1.59
BRCA1-214ENST00000477152 ANXA7P20073 488 aaKnown RBP5.12□□□□□ -1.59
BRCA1-214ENST00000477152 SPINK13Q1W4C9 94 aa5.12□□□□□ -1.59
BRCA1-214ENST00000477152 OR11H7Q8NGC8 314 aa5.12□□□□□ -1.59
BRCA1-214ENST00000477152 COX11Q9Y6N1 276 aa5.12□□□□□ -1.59
BRCA1-214ENST00000477152 NBDYA0A0U1RRE5 68 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 FNDC10F2Z333 226 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 CDK2AP2O75956 126 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 SFT2D2O95562 160 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 OR5G3P0C626 314 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 HIST1H1AQ02539 215 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-214ENST00000477152 PYDC2Q56P42 97 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 CYP2G1PQ6ZSU1 146 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 MCFD2Q8NI22 146 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 NTN5Q8WTR8 489 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-214ENST00000477152 SLC50A1Q9BRV3 221 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 SLC25A39Q9BZJ4 359 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-214ENST00000477152 NPVFQ9HCQ7 196 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 MUC4Q99102 2169 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms