RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 DEFB131AP59861 70 aa10.67□□□□□ -0.7
CCNL1-217ENST00000476367 TMEM41BQ5BJD5 291 aa10.67□□□□□ -0.7
CCNL1-217ENST00000476367 SBSPONQ8IVN8 264 aa10.67□□□□□ -0.7
CCNL1-217ENST00000476367 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
CCNL1-217ENST00000476367 MRPL32Q9BYC8 188 aaKnown RBP10.67□□□□□ -0.7
CCNL1-217ENST00000476367 TMEM14CQ9P0S9 112 aa10.67□□□□□ -0.7
CCNL1-217ENST00000476367 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
CCNL1-217ENST00000476367 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
CCNL1-217ENST00000476367 H3BTX0 84 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 NDUFB4O95168 129 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
CCNL1-217ENST00000476367 RPL7P18124 248 aaKnown RBP10.66□□□□□ -0.7
CCNL1-217ENST00000476367 GALR1P47211 349 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 RHOBP62745 196 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 IGFL4Q6B9Z1 124 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 FAM122CQ6P4D5 195 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 S100A7AQ86SG5 101 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 C20orf173Q96LM9 149 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 GPR82Q96P67 336 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 FAM110AQ9BQ89 295 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 HRH4Q9H3N8 390 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 NBEAL2Q6ZNJ1 2754 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 STAG3L2P0CL84 134 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 STAG3L3P0CL85 134 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 BPIFA4PQ86YQ2 179 aa10.66□□□□□ -0.7
CCNL1-217ENST00000476367 DNAH9Q9NYC9 4486 aa10.65□□□□□ -0.7
CCNL1-217ENST00000476367 HLA-DMBP28068 263 aa10.65□□□□□ -0.7
CCNL1-217ENST00000476367 CDC34P49427 236 aaPredicted RBP10.65□□□□□ -0.7
CCNL1-217ENST00000476367 DEFB1P60022 68 aa10.65□□□□□ -0.7
CCNL1-217ENST00000476367 PSMG4Q5JS54 123 aa10.65□□□□□ -0.7
CCNL1-217ENST00000476367 TRBV19A0A075B6N1 114 aa10.64□□□□□ -0.71
CCNL1-217ENST00000476367 MBP02144 154 aa10.64□□□□□ -0.71
CCNL1-217ENST00000476367 OR10J4P0C629 311 aa10.64□□□□□ -0.71
CCNL1-217ENST00000476367 RPL35AP18077 110 aaKnown RBP10.64□□□□□ -0.71
CCNL1-217ENST00000476367 ATF4P18848 351 aaPredicted RBP10.64□□□□□ -0.71
CCNL1-217ENST00000476367 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
CCNL1-217ENST00000476367 SNRPD3P62318 126 aaKnown RBP10.64□□□□□ -0.71
CCNL1-217ENST00000476367 HAGHQ16775 308 aa10.64□□□□□ -0.71
CCNL1-217ENST00000476367 FAM74A1Q5RGS3 127 aa10.64□□□□□ -0.71
CCNL1-217ENST00000476367 SUN5Q8TC36 379 aa10.64□□□□□ -0.71
CCNL1-217ENST00000476367 OR51M1Q9H341 326 aa10.64□□□□□ -0.71
CCNL1-217ENST00000476367 ZNF331Q9NQX6 463 aaPredicted RBP10.64□□□□□ -0.71
CCNL1-217ENST00000476367 LOC102724200A0A096LPH7 203 aaPredicted RBP10.63□□□□□ -0.71
CCNL1-217ENST00000476367 ARL14EPLP0DKL9 152 aa10.63□□□□□ -0.71
CCNL1-217ENST00000476367 PRB4P10163 310 aaPredicted RBP10.63□□□□□ -0.71
CCNL1-217ENST00000476367 HIST1H1EP10412 219 aaKnown RBP10.63□□□□□ -0.71
CCNL1-217ENST00000476367 RNF182Q8N6D2 247 aa10.63□□□□□ -0.71
CCNL1-217ENST00000476367 RNF141Q8WVD5 230 aa10.63□□□□□ -0.71
CCNL1-217ENST00000476367 A0A1W2PPV4 95 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 MEOX2P50222 304 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 SULT1A2P50226 295 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 EIF5AP63241 154 aaKnown RBP10.62□□□□□ -0.71
CCNL1-217ENST00000476367 AKR1C8PQ5T2L2 129 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 LINC00322Q6ZN03 302 aaPredicted RBP10.62□□□□□ -0.71
CCNL1-217ENST00000476367 LINC00052Q96N35 136 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 PAXXQ9BUH6 204 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 RNF24Q9Y225 148 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 CTXND1A0A1B0GTU2 59 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 KNCNA6PVL3 124 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 UMAD1C9J7I0 102 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 ISLRO14498 428 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 OR7C2O60412 319 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 NBEAP1P0C6P0 100 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 ID1P41134 155 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 PSMB3P49720 205 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 KHDC3LQ587J8 217 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 GDF5OSQ5U4N7 250 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 ALKAL2Q6UX46 152 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 PHYHIPLQ96FC7 376 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 C16orf92Q96LL3 132 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 ACTR3CQ9C0K3 210 aaPredicted RBP10.62□□□□□ -0.71
CCNL1-217ENST00000476367 TMPRSS5Q9H3S3 457 aa10.62□□□□□ -0.71
CCNL1-217ENST00000476367 TENM3Q9P273 2699 aa10.61□□□□□ -0.71
CCNL1-217ENST00000476367 FGF8P55075 233 aaPredicted RBP10.61□□□□□ -0.71
CCNL1-217ENST00000476367 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
CCNL1-217ENST00000476367 PQLC2Q6ZP29 291 aa10.61□□□□□ -0.71
CCNL1-217ENST00000476367 STHQ8IWL8 128 aa10.61□□□□□ -0.71
CCNL1-217ENST00000476367 MBD3L1Q8WWY6 194 aa10.61□□□□□ -0.71
CCNL1-217ENST00000476367 RETNQ9HD89 108 aa10.61□□□□□ -0.71
CCNL1-217ENST00000476367 ZNF253O75346 499 aa10.6□□□□□ -0.71
CCNL1-217ENST00000476367 GCHFRP30047 84 aa10.6□□□□□ -0.71
CCNL1-217ENST00000476367 LCN15Q6UWW0 184 aa10.6□□□□□ -0.71
CCNL1-217ENST00000476367 FAM213BQ8TBF2 198 aa10.6□□□□□ -0.71
CCNL1-217ENST00000476367 BLNKQ8WV28 456 aa10.6□□□□□ -0.71
CCNL1-217ENST00000476367 ZNF705FA8MVS1 300 aaPredicted RBP10.59□□□□□ -0.71
CCNL1-217ENST00000476367 F6UB75 175 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 NHLRC4P0CG21 123 aaPredicted RBP10.59□□□□□ -0.71
CCNL1-217ENST00000476367 APOC4P55056 127 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 TAS2R45P59539 299 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 UBE2L3P68036 154 aaKnown RBP10.59□□□□□ -0.71
CCNL1-217ENST00000476367 PDE6HQ13956 83 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 GUK1Q16774 197 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 SAMD13Q5VXD3 122 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 EXOC3-AS1Q8N2X6 119 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 LRRC20Q8TCA0 184 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 TM2D3Q9BRN9 247 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 ZMAT4Q9H898 229 aa10.59□□□□□ -0.71
CCNL1-217ENST00000476367 HUWE1Q7Z6Z7 4374 aaKnown RBP10.58□□□□□ -0.72
CCNL1-217ENST00000476367 MAP1LC3B2A6NCE7 125 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms