RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 KLHL30-AS1Q8NEE0 82 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 OR51G1Q8NGK1 321 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 CT45A3Q8NHU0 189 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM170AQ8WVE7 144 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 RPL36ALQ969Q0 106 aaKnown RBP3.28□□□□□ -1.88
VPS13D-206ENST00000476045 YPEL2Q96QA6 119 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 B9D2Q9BPU9 175 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 DERL1Q9BUN8 251 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 GGTLC1Q9BX51 225 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 IFI27L2Q9H2X8 130 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 KCNIP2Q9NS61 270 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 YTHDF2Q9Y5A9 579 aaKnown RBP3.28□□□□□ -1.88
VPS13D-206ENST00000476045 TRAPPC1Q9Y5R8 145 aa3.28□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF705FA8MVS1 300 aaPredicted RBP3.27□□□□□ -1.89
VPS13D-206ENST00000476045 A8MZ25 164 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 SLC17A3O00476 420 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 PDE6DO43924 150 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 MOSP00540 346 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 HLA-DRB1P01911 266 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 IGF1P05019 195 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF705DP0CH99 300 aaPredicted RBP3.27□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF705BP0CI00 300 aaPredicted RBP3.27□□□□□ -1.89
VPS13D-206ENST00000476045 IGLL1P15814 213 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 HIST1H1BP16401 226 aaKnown RBP3.27□□□□□ -1.89
VPS13D-206ENST00000476045 NPY1RP25929 384 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 GCHFRP30047 84 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 KIR2DS2P43631 304 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 INSL3P51460 131 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 PKIAP61925 76 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 JOSD1Q15040 202 aaPredicted RBP3.27□□□□□ -1.89
VPS13D-206ENST00000476045 TCTEX1D4Q5JR98 221 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 ACTL10Q5JWF8 245 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 C9orf66Q5T8R8 295 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 SLC25A48Q6ZT89 311 aaKnown RBP3.27□□□□□ -1.89
VPS13D-206ENST00000476045 MIR17HGQ75NE6 70 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 LINC01551Q86U37 167 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 OR10G8Q8NGN5 311 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 OR52E5Q8NH55 327 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 OR4S2Q8NH73 311 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 C4orf3Q8WVX3 66 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 DAZAP1Q96EP5 407 aaKnown RBP3.27□□□□□ -1.89
VPS13D-206ENST00000476045 C14orf144Q96I85 54 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 RASL11BQ9BPW5 248 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 KRTAP1-5Q9BYS1 174 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 SLC35D1Q9NTN3 355 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 OR51B2Q9Y5P1 312 aa3.27□□□□□ -1.89
VPS13D-206ENST00000476045 SAA2-SAA4A0A096LPE2 208 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 A0A1B0GV90 55 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 C15orf61A6NNL5 157 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 NCBP2LA6PVI3 153 aaKnown RBP3.26□□□□□ -1.89
VPS13D-206ENST00000476045 PRSS46E5RG02 174 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 TSTD3H0UI37 97 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 K7EIL1 84 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 UPK2O00526 184 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 ITGB1BP1O14713 200 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 NBR2O15453 112 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 RBFOX2O43251 390 aaKnown RBP eCLIP3.26□□□□□ -1.89
VPS13D-206ENST00000476045 NUPR1O60356 82 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 MPDU1O75352 247 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 CXorf1O96002 111 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 IGHG4P01861 327 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 TYMSP04818 313 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 SNRPCP09234 159 aaKnown RBP3.26□□□□□ -1.89
VPS13D-206ENST00000476045 LINC00869P0C866 280 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 STAG3L2P0CL84 134 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 STAG3L3P0CL85 134 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 SAA2P0DJI9 122 aaPredicted RBP3.26□□□□□ -1.89
VPS13D-206ENST00000476045 GZMBP10144 247 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 GATA2P23769 480 aaPredicted RBP3.26□□□□□ -1.89
VPS13D-206ENST00000476045 DDTP30046 118 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 OR10J1P30954 320 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 CNN1P51911 297 aaKnown RBP3.26□□□□□ -1.89
VPS13D-206ENST00000476045 CRIP2P52943 208 aaPredicted RBP3.26□□□□□ -1.89
VPS13D-206ENST00000476045 HSPE1P61604 102 aaKnown RBP3.26□□□□□ -1.89
VPS13D-206ENST00000476045 RHOBP62745 196 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 CFHR3Q02985 330 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF90Q03938 601 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 OR5I1Q13606 314 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 RAB31Q13636 194 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 PSG5Q15238 335 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 MMDQ15546 238 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 DNLZQ5SXM8 178 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 OR4A47Q6IF82 309 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 MOB3BQ86TA1 216 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 TMEM256Q8N2U0 113 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 LINC00469Q8N7U9 141 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 Q8N9W7 124 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF439Q8NDP4 499 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 SLC24A4Q8NFF2 622 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 OR1L6Q8NGR2 347 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 OCC1Q8TAD7 63 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 MYOZ3Q8TDC0 251 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 ST6GALNAC6Q969X2 333 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 TMEM18Q96B42 140 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 ACY3Q96HD9 319 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 IMMP2LQ96T52 175 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 PLEKHA3Q9HB20 300 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 NPVFQ9HCQ7 196 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 FKBP11Q9NYL4 201 aa3.26□□□□□ -1.89
VPS13D-206ENST00000476045 PEMTQ9UBM1 199 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms