RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RNF212Q495C1 297 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 SAMD13Q5VXD3 122 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 MORN5Q5VZ52 161 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 ZBTB8BQ8NAP8 495 aaPredicted RBP4.93□□□□□ -1.62
HDAC3-207ENST00000475549 OR8A1Q8NGG7 326 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 TMEM37Q8WXS4 190 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 GPR82Q96P67 336 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 HIGD1AQ9Y241 93 aa4.93□□□□□ -1.62
HDAC3-207ENST00000475549 TEX48A0A1B0GUV7 120 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 NAP1L6A6NFF2 107 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 PRAC2D3DTV9 90 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 H3BTX0 84 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 BOLA2-SMG1P6H3BVE0 249 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 ZNF701M0R085 212 aaPredicted RBP4.92□□□□□ -1.62
HDAC3-207ENST00000475549 DUSP14O95147 198 aaKnown RBP4.92□□□□□ -1.62
HDAC3-207ENST00000475549 INSP01308 110 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 MBPP02686 304 aaPredicted RBP4.92□□□□□ -1.62
HDAC3-207ENST00000475549 MED14OSP0DP75 135 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 RPL7P18124 248 aaKnown RBP4.92□□□□□ -1.62
HDAC3-207ENST00000475549 RAP2BP61225 183 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 DAD1P61803 113 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 DLK1P80370 383 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 HIST1H1AQ02539 215 aaPredicted RBP4.92□□□□□ -1.62
HDAC3-207ENST00000475549 PSG3Q16557 428 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 SPANXN2Q5MJ10 180 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 ZNF738Q8NE65 137 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 MITD1Q8WV92 249 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 MGST2Q99735 147 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 TMEM208Q9BTX3 173 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 PARD6GQ9BYG4 376 aaPredicted RBP4.92□□□□□ -1.62
HDAC3-207ENST00000475549 ARL6Q9H0F7 186 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 ARV1Q9H2C2 271 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 C11orf1Q9H5F2 150 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 NPVFQ9HCQ7 196 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 GSKIPQ9P0R6 139 aa4.92□□□□□ -1.62
HDAC3-207ENST00000475549 TRAV5A0A0B4J249 113 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 LYRM9A8MSI8 78 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 FNDC10F2Z333 226 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 H3BQ15 152 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 SLC17A3O00476 420 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 AGPAT2O15120 278 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 TSC22D2O75157 780 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 SCGB1D2O95969 90 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 IL7P13232 177 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 HTN1P15515 57 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 TAS2R30P59541 319 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 SELENOTP62341 195 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 IAH1Q2TAA2 248 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-207ENST00000475549 C4orf46Q504U0 113 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 TEPPQ6URK8 271 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 LINC00305Q7Z4B0 112 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 ZNF575Q86XF7 245 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 OR10P1Q8NGE3 313 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 ZNRF2Q8NHG8 242 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 RPUSD4Q96CM3 377 aaKnown RBP4.91□□□□□ -1.62
HDAC3-207ENST00000475549 SAT2Q96F10 170 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-207ENST00000475549 LINC01587Q99440 93 aa4.91□□□□□ -1.62
HDAC3-207ENST00000475549 ZNF331Q9NQX6 463 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-207ENST00000475549 CBY3A6NI87 242 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 F5H768 121 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 CCSO14618 274 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 CT45A10P0DMU9 189 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 IGLC2P0DOY2 106 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 CDKN1BP46527 198 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 TAS2R60P59551 318 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 B2MP61769 119 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 RHOBP62745 196 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 IL15RAQ13261 267 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 OPCMLQ14982 345 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 C1orf134Q5TEV5 83 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 TRIQKQ629K1 86 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 UBE2DNLQ8IWF7 75 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 LINC00612Q8N6U2 182 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 RNASE8Q8TDE3 154 aaKnown RBP4.9□□□□□ -1.63
HDAC3-207ENST00000475549 LINC00588Q9Y4M8 146 aa4.9□□□□□ -1.63
HDAC3-207ENST00000475549 FAM24AA6NFZ4 105 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 GOSR2O14653 212 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 HOXA5P20719 270 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 S100A7P31151 101 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 INPP1P49441 399 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 FAM3BP58499 235 aaPredicted RBP4.89□□□□□ -1.63
HDAC3-207ENST00000475549 PXDC1Q5TGL8 231 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 MIC13Q5XKP0 118 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 TMEM256Q8N2U0 113 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 C15orf53Q8NAA6 179 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 RNF141Q8WVD5 230 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 SEC22CQ9BRL7 303 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 GGACTQ9BVM4 153 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 KRTAP1-5Q9BYS1 174 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 C20orf85Q9H1P6 137 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 DNAJC4Q9NNZ3 241 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 NOP10Q9NPE3 64 aaKnown RBP4.89□□□□□ -1.63
HDAC3-207ENST00000475549 MGAT4CQ9UBM8 478 aa4.89□□□□□ -1.63
HDAC3-207ENST00000475549 TIMM8BQ9Y5J9 83 aaPredicted RBP4.89□□□□□ -1.63
HDAC3-207ENST00000475549 TRAV6A0A075B6T7 132 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 NBDYA0A0U1RRE5 68 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 H7BYZ3 331 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 LYRM1O43325 122 aa4.88□□□□□ -1.63
HDAC3-207ENST00000475549 CST7O76096 145 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms