RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 UBL3O95164 117 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 RAB5CP51148 216 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 RNASE10Q5GAN6 216 aaKnown RBP2.43□□□□□ -2.02
SMC5-203ENST00000475540 Q8IYB0 196 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 RNASE11Q8TAA1 199 aaKnown RBP2.43□□□□□ -2.02
SMC5-203ENST00000475540 NAT14Q8WUY8 206 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 DIRC1Q969H9 104 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 CALML5Q9NZT1 146 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 STRCQ7RTU9 1775 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 PTPRBP23467 1997 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 MYH10P35580 1976 aa2.43□□□□□ -2.02
SMC5-203ENST00000475540 DSPPQ9NZW4 1301 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 KIAA1107Q9UPP5 1409 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 TAF1LQ8IZX4 1826 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 CCDC88CQ9P219 2028 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 GLI3P10071 1580 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 FRMPD1Q5SYB0 1578 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 H3BRN7 92 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 C1QCP02747 245 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 ASAH2BP0C7U1 165 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 CRYGSP22914 178 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 MRPS36P82909 103 aaKnown RBP2.42□□□□□ -2.02
SMC5-203ENST00000475540 HIST1H1AQ02539 215 aaPredicted RBP2.42□□□□□ -2.02
SMC5-203ENST00000475540 TPRXLQ17RH7 258 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 C9orf163Q8N9P6 203 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 MORN4Q8NDC4 146 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 OR4S1Q8NGB4 309 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 POP5Q969H6 163 aaKnown RBP2.42□□□□□ -2.02
SMC5-203ENST00000475540 U3KQ87 197 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 KIAA2026Q5HYC2 2103 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 COL4A2P08572 1712 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 OVOS2A0A0J9YW53 1432 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 OVOS2Q6IE36 1432 aa2.42□□□□□ -2.02
SMC5-203ENST00000475540 FER1L6Q2WGJ9 1857 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 OTOGLQ3ZCN5 2332 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 BICRAQ9NZM4 1560 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 C5orf58C9J3I9 102 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 M0R2Z0 102 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 SULT1C4O75897 302 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 MT-ND4LP03901 98 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 SSR2P43308 183 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 LSM3P62310 102 aaKnown RBP2.41□□□□□ -2.02
SMC5-203ENST00000475540 HES1Q14469 280 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 ZNF846Q147U1 533 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 LRRC18Q8N456 261 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 OR2T35Q8NGX2 323 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 VPS25Q9BRG1 176 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 SMIM3Q9BZL3 60 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 SCN8AQ9UQD0 1980 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 DLC1Q96QB1 1528 aa2.41□□□□□ -2.02
SMC5-203ENST00000475540 LTBP2Q14767 1821 aa2.4□□□□□ -2.02
SMC5-203ENST00000475540 A0A096LPI6 279 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 OR2T8A6NH00 312 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 M0R233 179 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 ZNF737O75373 536 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 TPT1P13693 172 aaKnown RBP2.4□□□□□ -2.03
SMC5-203ENST00000475540 FABP4P15090 132 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 ROMO1P60602 79 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 MAXP61244 160 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 CDK5R1Q15078 307 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 HSD17B12Q53GQ0 312 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 TMEM244Q5VVB8 128 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 TMEM14EPQ6UXP3 125 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 TSTD1Q8NFU3 115 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 OR5D14Q8NGL3 314 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 TMEM254Q8TBM7 123 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 TXNDC17Q9BRA2 123 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 TAF9BQ9HBM6 251 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 OR5AC2Q9NZP5 309 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 ARHGEF11O15085 1522 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 DISP1Q96F81 1524 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 CUL9Q8IWT3 2517 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 CCDC171Q6TFL3 1326 aa2.4□□□□□ -2.03
SMC5-203ENST00000475540 J3QR89 54 aa2.39□□□□□ -2.03
SMC5-203ENST00000475540 KRTAP13-4Q3LI77 160 aa2.39□□□□□ -2.03
SMC5-203ENST00000475540 HYLS1Q96M11 299 aa2.39□□□□□ -2.03
SMC5-203ENST00000475540 TTTY12Q9BZ98 90 aa2.39□□□□□ -2.03
SMC5-203ENST00000475540 CRCT1Q9UGL9 99 aa2.39□□□□□ -2.03
SMC5-203ENST00000475540 FAM135BQ49AJ0 1406 aa2.39□□□□□ -2.03
SMC5-203ENST00000475540 PXDNLA1KZ92 1463 aa2.39□□□□□ -2.03
SMC5-203ENST00000475540 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.38□□□□□ -2.03
SMC5-203ENST00000475540 TRAV12-1A0A0B4J245 112 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 hDV103S1A0JD37 113 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 K7EP13 123 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 UQCRQO14949 82 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 CRPP02741 224 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 FOXA3P55318 350 aaPredicted RBP2.38□□□□□ -2.03
SMC5-203ENST00000475540 DSCR4P56555 118 aaPredicted RBP2.38□□□□□ -2.03
SMC5-203ENST00000475540 MMGT1Q8N4V1 131 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 LINC00311Q8N616 119 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 Q8N814 137 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 SPACA4Q8TDM5 124 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 C1orf54Q8WWF1 131 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 MUCL1Q96DR8 90 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 BANF2Q9H503 90 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 TPRKBQ9Y3C4 175 aa2.38□□□□□ -2.03
SMC5-203ENST00000475540 DISP2A7MBM2 1401 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 IGKV2D-26A0A0A0MRZ7 120 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 F8W036 122 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 TPST1O60507 370 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms