RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 LINC01587Q99440 93 aa8.66□□□□□ -1.02
TTC38-206ENST00000475467 Q9H8V8 135 aa8.66□□□□□ -1.02
TTC38-206ENST00000475467 FAM240BA0A1B0GVZ2 78 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 A6NHS1 94 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 ZNF705GA8MUZ8 300 aaPredicted RBP8.65□□□□□ -1.02
TTC38-206ENST00000475467 H3BP45 60 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 H7BYZ3 331 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 SCGB1D2O95969 90 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 CXCL2P19875 107 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 CDKN1BP46527 198 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 PLP1P60201 277 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 POLR2GP62487 172 aaKnown RBP eCLIP8.65□□□□□ -1.02
TTC38-206ENST00000475467 ID3Q02535 119 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 IAH1Q2TAA2 248 aaPredicted RBP8.65□□□□□ -1.02
TTC38-206ENST00000475467 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 MZT2BQ6NZ67 158 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 TMEM263Q8WUH6 116 aaKnown RBP8.65□□□□□ -1.02
TTC38-206ENST00000475467 MITD1Q8WV92 249 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 UPK3BQ9BT76 320 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 PSENENQ9NZ42 101 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 GSKIPQ9P0R6 139 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 LINC00588Q9Y4M8 146 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 HSPG2P98160 4391 aa8.65□□□□□ -1.02
TTC38-206ENST00000475467 A0A087X0K7 114 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 PLAC8L1A1L4L8 177 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 PRSS46E5RG02 174 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 M0R2Z0 102 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 SSSCA1O60232 199 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 H2AFB2P0C5Z0 115 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 RHOBP62745 196 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 AKR1C1Q04828 323 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 ZNF846Q147U1 533 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 SSX7Q7RTT5 188 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 CCDC28AQ8IWP9 274 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 ZBTB8BQ8NAP8 495 aaPredicted RBP8.64□□□□□ -1.03
TTC38-206ENST00000475467 ZNF738Q8NE65 137 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 OR8A1Q8NGG7 326 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 LRRC20Q8TCA0 184 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 SHANK2-AS3Q9BTD1 123 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 SLC25A39Q9BZJ4 359 aaPredicted RBP8.64□□□□□ -1.03
TTC38-206ENST00000475467 Q9H3A6 140 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 HIGD1AQ9Y241 93 aa8.64□□□□□ -1.03
TTC38-206ENST00000475467 TRAV8-2A0A0B4J237 113 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 FAM25EA8MYX2 175 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 FNDC10F2Z333 226 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 H3BRN7 92 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 HYPMO75409 117 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 IL5P05113 134 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 CXCL3P19876 107 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 FGL1Q08830 312 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 PSG3Q16557 428 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 ACOT7LQ6ZUV0 252 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 RXFP4Q8TDU9 374 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 RNF141Q8WVD5 230 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 GNPNAT1Q96EK6 184 aaPredicted RBP8.63□□□□□ -1.03
TTC38-206ENST00000475467 SMIM8Q96KF7 97 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 C17orf77Q96MU5 243 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 SLC50A1Q9BRV3 221 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 NUDT15Q9NV35 164 aa8.63□□□□□ -1.03
TTC38-206ENST00000475467 SMCO3A2RU48 225 aa8.62□□□□□ -1.03
TTC38-206ENST00000475467 C5orf51A6NDU8 294 aa8.62□□□□□ -1.03
TTC38-206ENST00000475467 M6PRP20645 277 aa8.62□□□□□ -1.03
TTC38-206ENST00000475467 HIST1H1AQ02539 215 aaPredicted RBP8.62□□□□□ -1.03
TTC38-206ENST00000475467 LCN15Q6UWW0 184 aa8.62□□□□□ -1.03
TTC38-206ENST00000475467 CYP2G1PQ6ZSU1 146 aa8.62□□□□□ -1.03
TTC38-206ENST00000475467 SPATA12Q7Z6I5 190 aa8.62□□□□□ -1.03
TTC38-206ENST00000475467 BAP18Q8IXM2 172 aa8.62□□□□□ -1.03
TTC38-206ENST00000475467 C12orf45Q8N5I9 185 aaPredicted RBP8.62□□□□□ -1.03
TTC38-206ENST00000475467 RNASE8Q8TDE3 154 aaKnown RBP8.62□□□□□ -1.03
TTC38-206ENST00000475467 ZNF431Q8TF32 576 aaPredicted RBP8.62□□□□□ -1.03
TTC38-206ENST00000475467 SEC22CQ9BRL7 303 aa8.62□□□□□ -1.03
TTC38-206ENST00000475467 PTTG2Q9NZH5 202 aa8.62□□□□□ -1.03
TTC38-206ENST00000475467 K7EPK0 472 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 L7N2F9 121 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 CCSO14618 274 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 AZU1P20160 251 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 VAMP2P63027 116 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 ASAH1Q13510 395 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 ENKURQ8TC29 256 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 NPVFQ9HCQ7 196 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 SCRT2Q9NQ03 307 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 BATF3Q9NR55 127 aa8.61□□□□□ -1.03
TTC38-206ENST00000475467 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
TTC38-206ENST00000475467 RLN2P04090 185 aa8.6□□□□□ -1.03
TTC38-206ENST00000475467 RNF182Q8N6D2 247 aa8.6□□□□□ -1.03
TTC38-206ENST00000475467 OR10P1Q8NGE3 313 aa8.6□□□□□ -1.03
TTC38-206ENST00000475467 NOP10Q9NPE3 64 aaKnown RBP8.6□□□□□ -1.03
TTC38-206ENST00000475467 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
TTC38-206ENST00000475467 MGAT4CQ9UBM8 478 aa8.6□□□□□ -1.03
TTC38-206ENST00000475467 RCL1Q9Y2P8 373 aaKnown RBP8.6□□□□□ -1.03
TTC38-206ENST00000475467 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
TTC38-206ENST00000475467 LSM5Q9Y4Y9 91 aaKnown RBP8.6□□□□□ -1.03
TTC38-206ENST00000475467 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
TTC38-206ENST00000475467 SNURFLB1AK76 121 aa8.59□□□□□ -1.03
TTC38-206ENST00000475467 EREGO14944 169 aa8.59□□□□□ -1.03
TTC38-206ENST00000475467 TSC22D2O75157 780 aa8.59□□□□□ -1.03
TTC38-206ENST00000475467 UPK1BO75841 260 aa8.59□□□□□ -1.03
TTC38-206ENST00000475467 MBPP02686 304 aaPredicted RBP8.59□□□□□ -1.03
TTC38-206ENST00000475467 OR5G3P0C626 314 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms