RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SCN2AQ99250 2005 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 PCDH15Q96QU1 1955 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 DMDP11532 3685 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 hDV102S1A0JD36 115 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 C19orf71A6NCJ1 209 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 ZNF324O75467 553 aaPredicted RBP3.83□□□□□ -1.8
NPHP3-206ENST00000474871 EFNA4P52798 201 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 DSCR9P59020 149 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 IZUMO4Q1ZYL8 232 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 SPINK14Q6IE38 97 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 TMEM52Q8NDY8 209 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 MRPL30Q8TCC3 161 aaKnown RBP3.83□□□□□ -1.8
NPHP3-206ENST00000474871 FAM60AQ9NP50 221 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 ADAMTS20P59510 1910 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 IGHV3-15A0A0B4J1V0 119 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 FAM181BA6NEQ2 426 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 PLAUP00749 431 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 ZNF32P17041 273 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 MPV17P39210 176 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 MYCNOSP40205 109 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 UNC119Q13432 240 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 ADIRFQ15847 76 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 C6orf223Q8N319 242 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 C4orf45Q96LM5 186 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 IGF2BP2-AS1Q96M15 143 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 DSCR8Q96T75 97 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 AGPAT4-IT1Q9H0P7 198 aa3.83□□□□□ -1.8
NPHP3-206ENST00000474871 AKAP6Q13023 2319 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 TNRC6BQ9UPQ9 1833 aaKnown RBP3.82□□□□□ -1.8
NPHP3-206ENST00000474871 UQCRQO14949 82 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 COX7A2P2O60397 106 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 TCL1BO95988 128 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 APOC4P55056 127 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 KRTDAPP60985 99 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 ASPHD1Q5U4P2 390 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 CCL19Q99731 98 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 RABAC1Q9UI14 185 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 PHF3Q92576 2039 aaKnown RBP3.82□□□□□ -1.8
NPHP3-206ENST00000474871 MED19A0JLT2 244 aaPredicted RBP3.82□□□□□ -1.8
NPHP3-206ENST00000474871 P01737 135 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 COX5AP20674 150 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 TNP2Q05952 138 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 C12orf74Q32Q52 190 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 LINC01356Q8N9X3 169 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 TRAV1-2A0A0B4J238 106 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 A0A1B0GWB2 263 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 J3QT63 122 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 APOMO95445 188 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 IFI6P09912 130 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 ZNF117Q03924 483 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 PRSS33Q8NF86 280 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 GNB1LQ9BYB4 327 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 TTTY12Q9BZ98 90 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 DPH3P1Q9H4G8 78 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 CEP192Q8TEP8 1941 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 RALGAPA1Q6GYQ0 2036 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 FER1L5A0AVI2 2057 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 HEATR5BQ9P2D3 2071 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 FAM24AA6NFZ4 105 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 USP17L23D6RBM5 183 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 ATP5G1P05496 136 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 ZNF688P0C7X2 276 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 HLA-DRB4P13762 266 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 LIFP15018 202 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 ATP5G3P48201 142 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 AP5S1Q9NUS5 200 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 RPUSD1Q9UJJ7 312 aaKnown RBP3.82□□□□□ -1.8
NPHP3-206ENST00000474871 HLA-DRB4X5D2U9 266 aa3.82□□□□□ -1.8
NPHP3-206ENST00000474871 TRIOO75962 3097 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 CACNA1EQ15878 2313 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 APCSP02743 223 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 TMEM258P61165 79 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 SLC25A34Q6PIV7 304 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 DGAT2L6Q6ZPD8 337 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 CYP2G1PQ6ZSU1 146 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 HIGD1BQ9P298 99 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 MDC1Q14676 2089 aaKnown RBP3.81□□□□□ -1.8
NPHP3-206ENST00000474871 TRAV5A0A0B4J249 113 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 A8MWL6 223 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 IGLL5B9A064 214 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 CA6P23280 308 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 ZNF726P1Q15940 193 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 RRN3P1Q2M238 152 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 RFLNBQ8N5W9 214 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 PFN4Q8NHR9 129 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 TRAPPC1Q9Y5R8 145 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 UNC13CQ8NB66 2214 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 CACNA1IQ9P0X4 2223 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 CACNA1HO95180 2353 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 PAX4O43316 350 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 SUPT4H1P63272 117 aaKnown RBP3.81□□□□□ -1.8
NPHP3-206ENST00000474871 IGLV3-21P80748 117 aaPredicted RBP3.81□□□□□ -1.8
NPHP3-206ENST00000474871 GAGE2BQ13066 116 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 GAGE2EQ4V326 116 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 PVRIGQ6DKI7 326 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
NPHP3-206ENST00000474871 LINC00596Q86U02 117 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 Q8N1Y9 231 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 NUP35Q8NFH5 326 aa3.81□□□□□ -1.8
NPHP3-206ENST00000474871 DCANP1Q8TF63 244 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms