RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PFDN5Q99471 154 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 ARPC5LQ9BPX5 153 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 FAM110AQ9BQ89 295 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 RPRMQ9NS64 109 aa5.16□□□□□ -1.58
LIMD1-204ENST00000474665 ZMAT5Q9UDW3 170 aaKnown RBP5.16□□□□□ -1.58
LIMD1-204ENST00000474665 C17orf112F2Z3M2 114 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 DNASE2O00115 360 aaPredicted RBP5.15□□□□□ -1.59
LIMD1-204ENST00000474665 JTBO76095 146 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 GIG44P09565 113 aaPredicted RBP5.15□□□□□ -1.59
LIMD1-204ENST00000474665 FRMD6-AS1P0C7T7 363 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 PYYP10082 97 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 SPP1P10451 314 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 M6PRP20645 277 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 GALR1P47211 349 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 DEFB131AP59861 70 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 ZNF726P1Q15940 193 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 GDF5OSQ5U4N7 250 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 GTSCR1Q86UQ5 136 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 RNF182Q8N6D2 247 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 FXYD5Q96DB9 178 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 HYLS1Q96M11 299 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 GPR82Q96P67 336 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 HRH4Q9H3N8 390 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 KCNIP2Q9NS61 270 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 ZNF586Q9NXT0 402 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 TMEM14CQ9P0S9 112 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 PFDN2Q9UHV9 154 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 FUT9Q9Y231 359 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 BOLA1Q9Y3E2 137 aa5.15□□□□□ -1.59
LIMD1-204ENST00000474665 STARD9Q9P2P6 4700 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 BORCS7-ASMTA0A0B4J1R7 106 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 KNCNA6PVL3 124 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 ISLRO14498 428 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 HMGB3O15347 200 aaKnown RBP5.14□□□□□ -1.59
LIMD1-204ENST00000474665 PSMB3P49720 205 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 FHITP49789 147 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 PAFAH1B2P68402 229 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 SERF2P84101 59 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 ZFP69Q49AA0 526 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 PSMG4Q5JS54 123 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 BPIFA4PQ86YQ2 179 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 SBSPONQ8IVN8 264 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 OR10G4Q8NGN3 311 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 OR10G9Q8NGN4 311 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 OR10G7Q8NGN6 311 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 STOML3Q8TAV4 291 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 RAB24Q969Q5 203 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 GNPNAT1Q96EK6 184 aaPredicted RBP5.14□□□□□ -1.59
LIMD1-204ENST00000474665 ZNF471Q9BX82 626 aaPredicted RBP5.14□□□□□ -1.59
LIMD1-204ENST00000474665 MRPL32Q9BYC8 188 aaKnown RBP5.14□□□□□ -1.59
LIMD1-204ENST00000474665 SRD5A3Q9H8P0 318 aa5.14□□□□□ -1.59
LIMD1-204ENST00000474665 ZNF331Q9NQX6 463 aaPredicted RBP5.14□□□□□ -1.59
LIMD1-204ENST00000474665 FRAS1Q86XX4 4008 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 DNAH7Q8WXX0 4024 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 TRBV19A0A075B6N1 114 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 PRAC2D3DTV9 90 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 F6UB75 175 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 OR10J4P0C629 311 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 HIST1H1EP10412 219 aaKnown RBP5.13□□□□□ -1.59
LIMD1-204ENST00000474665 ATF4P18848 351 aaPredicted RBP5.13□□□□□ -1.59
LIMD1-204ENST00000474665 RHOBP62745 196 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 HAGHQ16775 308 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 ACOT6Q3I5F7 207 aaPredicted RBP5.13□□□□□ -1.59
LIMD1-204ENST00000474665 TMEM41BQ5BJD5 291 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 FAM122CQ6P4D5 195 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 BAP18Q8IXM2 172 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 TMED6Q8WW62 240 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 PHYHIPLQ96FC7 376 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 PAXXQ9BUH6 204 aa5.13□□□□□ -1.59
LIMD1-204ENST00000474665 KANTRA0A1W2PQU2 76 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 ZNF705FA8MVS1 300 aaPredicted RBP5.12□□□□□ -1.59
LIMD1-204ENST00000474665 H3BMM0 161 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 BOLA2-SMG1P6H3BVE0 249 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 M0R3E3 92 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 PFDN1O60925 122 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 NBEAP1P0C6P0 100 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 SEC11BP0C7V7 166 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 ZNF705DP0CH99 300 aaPredicted RBP5.12□□□□□ -1.59
LIMD1-204ENST00000474665 ZNF705BP0CI00 300 aaPredicted RBP5.12□□□□□ -1.59
LIMD1-204ENST00000474665 STAG3L2P0CL84 134 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 STAG3L3P0CL85 134 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 RPL35AP18077 110 aaKnown RBP5.12□□□□□ -1.59
LIMD1-204ENST00000474665 S100A7P31151 101 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 CDC34P49427 236 aaPredicted RBP5.12□□□□□ -1.59
LIMD1-204ENST00000474665 MEOX2P50222 304 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 ACTL10Q5JWF8 245 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 LCN15Q6UWW0 184 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 AMTNQ6UX39 209 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 S100A7AQ86SG5 101 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 TRPT1Q86TN4 253 aaKnown RBP5.12□□□□□ -1.59
LIMD1-204ENST00000474665 SUN5Q8TC36 379 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 BLNKQ8WV28 456 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 RNF141Q8WVD5 230 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 C16orf92Q96LL3 132 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 LINC00052Q96N35 136 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 OR51M1Q9H341 326 aa5.12□□□□□ -1.59
LIMD1-204ENST00000474665 A0A0J9YX75 114 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 A8MTW9 85 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 OR7C2O60412 319 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 ZNF253O75346 499 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms