RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 TRGV9Q99603 122 aa8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 RPRMQ9NS64 109 aa8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 ZNF705EA8MWA4 302 aaPredicted RBP8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 K7EQG2 157 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 IGKV1-17P01599 117 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 OR10J1P30954 320 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 SELENOTP62341 195 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 TIGITQ495A1 244 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 TMEM41BQ5BJD5 291 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 CYP2G1PQ6ZSU1 146 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 STXBP6Q8NFX7 210 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 PCNPQ8WW12 178 aaKnown RBP8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 MBD3L1Q8WWY6 194 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 ACY3Q96HD9 319 aa8.08□□□□□ -1.12
SEMA4D-216ENST00000474258 KMT2AQ03164 3969 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 TRAV1-1A0A0B4J248 108 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 IGLC1P0CG04 106 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 M6PRP20645 277 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 FHITP49789 147 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 B2MP61769 119 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 ACOT6Q3I5F7 207 aaPredicted RBP8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 FFAR4Q5NUL3 377 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 MIC13Q5XKP0 118 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 MORN3Q6PF18 240 aaPredicted RBP8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 RPP25LQ8N5L8 163 aaKnown RBP8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 Q8WTZ3 238 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 SLC39A9Q9NUM3 307 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 PXMP4Q9Y6I8 212 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 U3KQE9 123 aa8.07□□□□□ -1.12
SEMA4D-216ENST00000474258 ZFP92A6NM28 416 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 DEFB4AO15263 64 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 ZNF688P0C7X2 276 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 TCTAP57738 103 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 PLP1P60201 277 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 YPEL3P61236 119 aaPredicted RBP8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 PXDC1Q5TGL8 231 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 Q6ZRG5 221 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 TRPT1Q86TN4 253 aaKnown RBP8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 OR10G4Q8NGN3 311 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 OR10G9Q8NGN4 311 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 OR10G7Q8NGN6 311 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 FAM213BQ8TBF2 198 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 C2CD4CQ8TF44 421 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 DCANP1Q8TF63 244 aa8.06□□□□□ -1.12
SEMA4D-216ENST00000474258 HELTA6NFD8 242 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 KNCNA6PVL3 124 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 C11orf94C9JXX5 98 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 FABP1P07148 127 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 GIG44P09565 113 aaPredicted RBP8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 H2AFB1P0C5Y9 115 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 MIFP14174 115 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 RAB2AP61019 212 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 ZNF90Q03938 601 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 ZNF726P1Q15940 193 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 C16orf54Q6UWD8 224 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 EIF4E3Q8N5X7 224 aaKnown RBP8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 Q8NAQ8 132 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 BPIFCQ8NFQ6 507 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 GLMPQ8WWB7 406 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 ACTR3CQ9C0K3 210 aaPredicted RBP8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 HRH4Q9H3N8 390 aa8.05□□□□□ -1.12
SEMA4D-216ENST00000474258 CTXND1A0A1B0GTU2 59 aa8.04□□□□□ -1.12
SEMA4D-216ENST00000474258 GATA2P23769 480 aaPredicted RBP8.04□□□□□ -1.12
SEMA4D-216ENST00000474258 GCSAMLQ5JQS6 135 aa8.04□□□□□ -1.12
SEMA4D-216ENST00000474258 ACTL10Q5JWF8 245 aa8.04□□□□□ -1.12
SEMA4D-216ENST00000474258 SLC7A5P1Q8MH63 180 aa8.04□□□□□ -1.12
SEMA4D-216ENST00000474258 RAB24Q969Q5 203 aa8.04□□□□□ -1.12
SEMA4D-216ENST00000474258 DNAJC4Q9NNZ3 241 aa8.04□□□□□ -1.12
SEMA4D-216ENST00000474258 ELOA3CA0A087WX78 387 aaPredicted RBP8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 TOMM40O96008 361 aa8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 HBE1P02100 147 aa8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 IL4P05112 153 aa8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 RBMY1A1P0DJD3 496 aaKnown RBP8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 RBMY1CP0DJD4 496 aa8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 RD3LP0DJH9 198 aa8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 RBMY1FQ15415 496 aaKnown RBP8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 PATE2Q6UY27 113 aa8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 SFT2D1Q8WV19 159 aa8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 TMEM37Q8WXS4 190 aa8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 SEPSECSQ9HD40 501 aaKnown RBP8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 PFDN2Q9UHV9 154 aa8.03□□□□□ -1.12
SEMA4D-216ENST00000474258 IGHV4-28A0A0C4DH34 117 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 A0A1W2PPV4 95 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 RAB19A4D1S5 217 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 IGLL5B9A064 214 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 TEX46H3BTG2 121 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 BUB3O43684 328 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 OR5G3P0C626 314 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 PSG1P11464 419 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 CDC34P49427 236 aaPredicted RBP8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 NUTF2P61970 127 aaKnown RBP8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 SNRPD3P62318 126 aaKnown RBP8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 RHOBP62745 196 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 CCL20P78556 96 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 USF2Q15853 346 aaPredicted RBP8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 PSMG4Q5JS54 123 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 FAM122CQ6P4D5 195 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 SSX7Q7RTT5 188 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 COMMD7Q86VX2 200 aa8.02□□□□□ -1.13
SEMA4D-216ENST00000474258 OR1L4Q8NGR5 311 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms