RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 M6PRP20645 277 aa13.71□□□□□ -0.21
CCDC171-206ENST00000474193 SNRPD3P62318 126 aaKnown RBP13.71□□□□□ -0.21
CCDC171-206ENST00000474193 RHOBP62745 196 aa13.71□□□□□ -0.21
CCDC171-206ENST00000474193 GCSAMLQ5JQS6 135 aa13.71□□□□□ -0.21
CCDC171-206ENST00000474193 SAMD13Q5VXD3 122 aa13.71□□□□□ -0.21
CCDC171-206ENST00000474193 RARRES2Q99969 163 aa13.71□□□□□ -0.21
CCDC171-206ENST00000474193 MRPL32Q9BYC8 188 aaKnown RBP13.71□□□□□ -0.21
CCDC171-206ENST00000474193 CYTL1Q9NRR1 136 aa13.71□□□□□ -0.21
CCDC171-206ENST00000474193 A0A1W2PPV4 95 aa13.7□□□□□ -0.22
CCDC171-206ENST00000474193 CXorf65A6NEN9 183 aa13.7□□□□□ -0.22
CCDC171-206ENST00000474193 CA1P00915 261 aaPredicted RBP13.7□□□□□ -0.22
CCDC171-206ENST00000474193 ZNF688P0C7X2 276 aa13.7□□□□□ -0.22
CCDC171-206ENST00000474193 MEOX2P50222 304 aa13.7□□□□□ -0.22
CCDC171-206ENST00000474193 LGALSLQ3ZCW2 172 aaPredicted RBP13.7□□□□□ -0.22
CCDC171-206ENST00000474193 TMEM41BQ5BJD5 291 aa13.7□□□□□ -0.22
CCDC171-206ENST00000474193 OR2G3Q8NGZ4 309 aa13.7□□□□□ -0.22
CCDC171-206ENST00000474193 DNAH7Q8WXX0 4024 aa13.69□□□□□ -0.22
CCDC171-206ENST00000474193 ID1P41134 155 aa13.69□□□□□ -0.22
CCDC171-206ENST00000474193 MORN3Q6PF18 240 aaPredicted RBP13.69□□□□□ -0.22
CCDC171-206ENST00000474193 OR10G4Q8NGN3 311 aa13.69□□□□□ -0.22
CCDC171-206ENST00000474193 OR10G9Q8NGN4 311 aa13.69□□□□□ -0.22
CCDC171-206ENST00000474193 OR10G7Q8NGN6 311 aa13.69□□□□□ -0.22
CCDC171-206ENST00000474193 LRRC20Q8TCA0 184 aa13.69□□□□□ -0.22
CCDC171-206ENST00000474193 FUT9Q9Y231 359 aa13.69□□□□□ -0.22
CCDC171-206ENST00000474193 TPT1P13693 172 aaKnown RBP13.68□□□□□ -0.22
CCDC171-206ENST00000474193 TAS2R45P59539 299 aa13.68□□□□□ -0.22
CCDC171-206ENST00000474193 AKR1C8PQ5T2L2 129 aa13.68□□□□□ -0.22
CCDC171-206ENST00000474193 OR11H2Q8NH07 326 aa13.68□□□□□ -0.22
CCDC171-206ENST00000474193 DCANP1Q8TF63 244 aa13.68□□□□□ -0.22
CCDC171-206ENST00000474193 SH3BGRL3Q9H299 93 aa13.68□□□□□ -0.22
CCDC171-206ENST00000474193 SEPSECSQ9HD40 501 aaKnown RBP13.68□□□□□ -0.22
CCDC171-206ENST00000474193 RFNGQ9Y644 331 aa13.68□□□□□ -0.22
CCDC171-206ENST00000474193 TRAV5A0A0B4J249 113 aa13.67□□□□□ -0.22
CCDC171-206ENST00000474193 SPP1P10451 314 aa13.67□□□□□ -0.22
CCDC171-206ENST00000474193 PSMG4Q5JS54 123 aa13.67□□□□□ -0.22
CCDC171-206ENST00000474193 FAM24BQ8N5W8 94 aa13.67□□□□□ -0.22
CCDC171-206ENST00000474193 C16orf92Q96LL3 132 aa13.67□□□□□ -0.22
CCDC171-206ENST00000474193 NUPR2A6NF83 97 aa13.66□□□□□ -0.22
CCDC171-206ENST00000474193 RAB2AP61019 212 aa13.66□□□□□ -0.22
CCDC171-206ENST00000474193 NUTF2P61970 127 aaKnown RBP13.66□□□□□ -0.22
CCDC171-206ENST00000474193 PMS2P11Q13670 270 aa13.66□□□□□ -0.22
CCDC171-206ENST00000474193 ACTL10Q5JWF8 245 aa13.66□□□□□ -0.22
CCDC171-206ENST00000474193 MORN5Q5VZ52 161 aa13.66□□□□□ -0.22
CCDC171-206ENST00000474193 EIF5AL1Q6IS14 154 aaKnown RBP13.66□□□□□ -0.22
CCDC171-206ENST00000474193 FAM122CQ6P4D5 195 aa13.66□□□□□ -0.22
CCDC171-206ENST00000474193 MIR17HGQ75NE6 70 aa13.66□□□□□ -0.22
CCDC171-206ENST00000474193 BAP18Q8IXM2 172 aa13.66□□□□□ -0.22
CCDC171-206ENST00000474193 OR7C2O60412 319 aa13.65□□□□□ -0.22
CCDC171-206ENST00000474193 GUK1Q16774 197 aa13.65□□□□□ -0.22
CCDC171-206ENST00000474193 KHDC3LQ587J8 217 aa13.65□□□□□ -0.22
CCDC171-206ENST00000474193 SPATA31B1PQ5VZV4 182 aa13.65□□□□□ -0.22
CCDC171-206ENST00000474193 SLC51BQ86UW2 128 aa13.65□□□□□ -0.22
CCDC171-206ENST00000474193 C9orf62Q8N4C0 152 aa13.65□□□□□ -0.22
CCDC171-206ENST00000474193 ACTR3CQ9C0K3 210 aaPredicted RBP13.65□□□□□ -0.22
CCDC171-206ENST00000474193 TMEM14CQ9P0S9 112 aa13.65□□□□□ -0.22
CCDC171-206ENST00000474193 KLK5Q9Y337 293 aaPredicted RBP13.65□□□□□ -0.22
CCDC171-206ENST00000474193 A0A087X0K7 114 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 KNCNA6PVL3 124 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 ISLRO14498 428 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 SEC11BP0C7V7 166 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 CDC34P49427 236 aaPredicted RBP13.64□□□□□ -0.23
CCDC171-206ENST00000474193 PSMB3P49720 205 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 LCN15Q6UWW0 184 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 STOML3Q8TAV4 291 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 LINC00052Q96N35 136 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 SLC25A2Q9BXI2 301 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 OR51M1Q9H341 326 aa13.64□□□□□ -0.23
CCDC171-206ENST00000474193 HIST1H1EP10412 219 aaKnown RBP13.63□□□□□ -0.23
CCDC171-206ENST00000474193 TRPT1Q86TN4 253 aaKnown RBP13.63□□□□□ -0.23
CCDC171-206ENST00000474193 PAXXQ9BUH6 204 aa13.63□□□□□ -0.23
CCDC171-206ENST00000474193 C1QTNF4Q9BXJ3 329 aa13.63□□□□□ -0.23
CCDC171-206ENST00000474193 HRH4Q9H3N8 390 aa13.63□□□□□ -0.23
CCDC171-206ENST00000474193 TENM2Q9NT68 2774 aa13.62□□□□□ -0.23
CCDC171-206ENST00000474193 UMAD1C9J7I0 102 aa13.62□□□□□ -0.23
CCDC171-206ENST00000474193 NKX2-5P52952 324 aaPredicted RBP13.62□□□□□ -0.23
CCDC171-206ENST00000474193 SLC50A1Q9BRV3 221 aa13.62□□□□□ -0.23
CCDC171-206ENST00000474193 RPRMQ9NS64 109 aa13.62□□□□□ -0.23
CCDC171-206ENST00000474193 MRPS12O15235 138 aaKnown RBP13.61□□□□□ -0.23
CCDC171-206ENST00000474193 SNRPCP09234 159 aaKnown RBP13.61□□□□□ -0.23
CCDC171-206ENST00000474193 IGLC2P0DOY2 106 aa13.61□□□□□ -0.23
CCDC171-206ENST00000474193 CEMP1Q6PRD7 247 aaPredicted RBP13.61□□□□□ -0.23
CCDC171-206ENST00000474193 PQLC2Q6ZP29 291 aa13.61□□□□□ -0.23
CCDC171-206ENST00000474193 RPP25LQ8N5L8 163 aaKnown RBP13.61□□□□□ -0.23
CCDC171-206ENST00000474193 C11orf45Q8TAV5 145 aa13.61□□□□□ -0.23
CCDC171-206ENST00000474193 RNF141Q8WVD5 230 aa13.61□□□□□ -0.23
CCDC171-206ENST00000474193 RAB24Q969Q5 203 aa13.61□□□□□ -0.23
CCDC171-206ENST00000474193 FAM167A-AS1Q96KT0 104 aa13.61□□□□□ -0.23
CCDC171-206ENST00000474193 PYYP10082 97 aa13.6□□□□□ -0.23
CCDC171-206ENST00000474193 BLNKQ8WV28 456 aa13.6□□□□□ -0.23
CCDC171-206ENST00000474193 C11orf68Q9H3H3 251 aaKnown RBP13.6□□□□□ -0.23
CCDC171-206ENST00000474193 CLEC5AQ9NY25 188 aa13.6□□□□□ -0.23
CCDC171-206ENST00000474193 H3BQ15 152 aa13.59□□□□□ -0.23
CCDC171-206ENST00000474193 H3BTX0 84 aa13.59□□□□□ -0.23
CCDC171-206ENST00000474193 SOCS3O14543 225 aa13.59□□□□□ -0.23
CCDC171-206ENST00000474193 OR10J4P0C629 311 aa13.59□□□□□ -0.23
CCDC171-206ENST00000474193 NBEAP1P0C6P0 100 aa13.59□□□□□ -0.23
CCDC171-206ENST00000474193 UBE2L3P68036 154 aaKnown RBP13.59□□□□□ -0.23
CCDC171-206ENST00000474193 PSG9Q00887 426 aa13.59□□□□□ -0.23
CCDC171-206ENST00000474193 PDE6HQ13956 83 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms