RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ZNF436-AS1Q8NC38 126 aaPredicted RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 OR10W1Q8NGF6 305 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 OR4P4Q8NGL7 312 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 OR13D1Q8NGV5 346 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 OR4S2Q8NH73 311 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 CLDND2Q8NHS1 167 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SUN5Q8TC36 379 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 DTD1Q8TEA8 209 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 CA5BP1Q8WTZ4 195 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 C17orf50Q8WW18 174 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 H1FXQ92522 213 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 CCL17Q92583 94 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 NRGNQ92686 78 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TNFRSF14Q92956 283 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 MARC2Q969Z3 335 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 NARS2Q96I59 477 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF714Q96N38 554 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TBX15Q96SF7 602 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 MGST2Q99735 147 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RARRES2Q99969 163 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PSMG3Q9BT73 122 aaPredicted RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 C20orf24Q9BUV8 137 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM147Q9BVK8 224 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 GGTLC1Q9BX51 225 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SEC11CQ9BY50 192 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 NPCDR1Q9BY65 106 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PARD6GQ9BYG4 376 aaPredicted RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 MAP1LC3BQ9GZQ8 125 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SLC25A31Q9H0C2 315 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM133Q9H2Q1 129 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 NCOR1P1Q9H4R4 102 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PLEKHF2Q9H8W4 249 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SLC25A22Q9H936 323 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 Q9HAA7 133 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TREM1Q9NP99 234 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 ZC4H2Q9NQZ6 224 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SIRT7Q9NRC8 400 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RPRMQ9NS64 109 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 SLC35D1Q9NTN3 355 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 CBLN4Q9NTU7 201 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM14BQ9NUH8 114 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 UQCC1Q9NVA1 299 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 BET1LQ9NYM9 111 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 PSENENQ9NZ42 101 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 KCNIP1Q9NZI2 227 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 KAAG1Q9UBP8 84 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 GLS2Q9UI32 602 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RNF24Q9Y225 148 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 FOXA2Q9Y261 457 aaPredicted RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 STRAPQ9Y3F4 350 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 PPIAL4AQ9Y536 164 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 RBM7Q9Y580 266 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 TIMM9Q9Y5J7 89 aa1□□□□□ -2.25
CCDC39-203ENST00000473854 EPPK1P58107 5090 aaKnown RBP1□□□□□ -2.25
CCDC39-203ENST00000473854 TRBV20OR9-2A0A075B6H5 130 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 A0A096LNT2 108 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 BORCS7-ASMTA0A0B4J1R7 106 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV3-21A0A0B4J1V1 117 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 TRAV1-1A0A0B4J248 108 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV1-3A0A0C4DH29 117 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV2-70DA0A0C4DH43 119 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CTXND1A0A1B0GTU2 59 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 TEX50A0A1B0GTY4 177 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 A0A1W2PRD5 423 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 A0A1W2PRF3 423 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 A0A1W2PRM7 423 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 hADV38S2A0JD32 116 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SMCO3A2RU48 225 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 C7orf77A4D0Y5 90 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 COLCA2A8K830 154 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CEBPZOSA8MTT3 80 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 GGTLC3B5MD39 225 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 UMAD1C9J7I0 102 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 INS-IGF2F8WCM5 200 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 LY6LH3BQJ8 138 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 UPK2O00526 184 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 NDUFB3O43676 98 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SOX15O60248 233 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SNAPC5O75971 98 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 NDUFA3O95167 84 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CA2P00918 260 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 IFNA17P01571 189 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV3-48P01763 117 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 APOA2P02652 100 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 PRH1P02810 166 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 HSPB1P04792 205 aaKnown RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 REG1AP05451 166 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CXCL1P09341 107 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR8U8P0C7N1 319 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 LINC00869P0C866 280 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 STAG3L2P0CL84 134 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 STAG3L3P0CL85 134 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 ARL14EPLP0DKL9 152 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 AREGP15514 252 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 PVALBP20472 110 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 GZMHP20718 246 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 NPPCP23582 126 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CD24P25063 80 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 S100GP29377 79 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OPRK1P41145 380 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms