RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 ZNF705BP0CI00 300 aaPredicted RBP8.36□□□□□ -1.07
CPNE1-222ENST00000473373 HLA-DMBP28068 263 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 B2MP61769 119 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 LCN15Q6UWW0 184 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 ZNF709Q8N972 641 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 SLC50A1Q9BRV3 221 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 NMES1Q9C002 83 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 DNAJC4Q9NNZ3 241 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 X6R8D5 127 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 AMBPP02760 352 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 RBMY1A1P0DJD3 496 aaKnown RBP8.35□□□□□ -1.07
CPNE1-222ENST00000473373 RBMY1CP0DJD4 496 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 CNN1P51911 297 aaKnown RBP8.35□□□□□ -1.07
CPNE1-222ENST00000473373 IFITM3Q01628 133 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 CLINT1Q14677 625 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 RBMY1FQ15415 496 aaKnown RBP8.35□□□□□ -1.07
CPNE1-222ENST00000473373 SPINK13Q1W4C9 94 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 PATE2Q6UY27 113 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 OR5C1Q8NGR4 320 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 SLC39A9Q9NUM3 307 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 RFNGQ9Y644 331 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 PXMP4Q9Y6I8 212 aa8.35□□□□□ -1.07
CPNE1-222ENST00000473373 A0A087X0K7 114 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 TMEM189A5PLL7 270 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 SMIM9A6NGZ8 99 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 H3BTX0 84 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 M0R2Z0 102 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 MPDU1O75352 247 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 INSP01308 110 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 PRB4P10163 310 aaPredicted RBP8.34□□□□□ -1.07
CPNE1-222ENST00000473373 NHLH2Q02577 135 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 OPCMLQ14982 345 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 PSG3Q16557 428 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 RRN3P1Q2M238 152 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 ZNF767PQ75MW2 155 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 THAP6Q8TBB0 222 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 LINC00476Q8WZB0 136 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 MARVELD1Q9BSK0 173 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 WDR83OSQ9Y284 106 aa8.34□□□□□ -1.07
CPNE1-222ENST00000473373 C17orf112F2Z3M2 114 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 SPART-AS1P0CW21 52 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 HTN1P15515 57 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 CXCL2P19875 107 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 RPL29P47914 159 aaKnown RBP8.33□□□□□ -1.08
CPNE1-222ENST00000473373 Q6ZTC4 211 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 OR11H7Q8NGC8 314 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 OR10J6PQ8NGY7 276 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 PPP1R1CQ8WVI7 109 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 RPUSD4Q96CM3 377 aaKnown RBP8.33□□□□□ -1.08
CPNE1-222ENST00000473373 CLUHP3Q96NS8 147 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 HRH4Q9H3N8 390 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 C11orf1Q9H5F2 150 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 KCNIP2Q9NS61 270 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 OR5AC2Q9NZP5 309 aa8.33□□□□□ -1.08
CPNE1-222ENST00000473373 TRAV8-2A0A0B4J237 113 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 TEX48A0A1B0GUV7 120 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 LOC102723971A0A1B0GUV8 181 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 BOLA2-SMG1P6H3BVE0 249 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 IFNA5P01569 189 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 HTN3P15516 51 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 CXCL3P19876 107 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 VWC2Q2TAL6 325 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 BAP18Q8IXM2 172 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 OR8A1Q8NGG7 326 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 SCGB1C1Q8TD33 95 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 TMEM37Q8WXS4 190 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 IGF2BP2-AS1Q96M15 143 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 C17orf77Q96MU5 243 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 NPCDR1Q9BY65 106 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 CELA1Q9UNI1 258 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 TIMM9Q9Y5J7 89 aa8.32□□□□□ -1.08
CPNE1-222ENST00000473373 TRAV12-2A0A075B6T6 113 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 DEFB131BA0A096LNP1 70 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 TRAV5A0A0B4J249 113 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 J3KRW8 73 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 PRR20EP86478 221 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 PRR20CP86479 221 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 PRR20DP86480 221 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 PRR20BP86481 221 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 PRR20AP86496 221 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 IL15RAQ13261 267 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 GUK1Q16774 197 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 ZNF705AQ6ZN79 300 aaPredicted RBP8.31□□□□□ -1.08
CPNE1-222ENST00000473373 BLNKQ8WV28 456 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 LINC01587Q99440 93 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 NEU1Q99519 415 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 SMIM3Q9BZL3 60 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 AAMDCQ9H7C9 122 aa8.31□□□□□ -1.08
CPNE1-222ENST00000473373 ZNF331Q9NQX6 463 aaPredicted RBP8.31□□□□□ -1.08
CPNE1-222ENST00000473373 ZNF705FA8MVS1 300 aaPredicted RBP8.3□□□□□ -1.08
CPNE1-222ENST00000473373 MPC2O95563 127 aa8.3□□□□□ -1.08
CPNE1-222ENST00000473373 TSPOP30536 169 aa8.3□□□□□ -1.08
CPNE1-222ENST00000473373 H2BFSP57053 126 aa8.3□□□□□ -1.08
CPNE1-222ENST00000473373 TCTAP57738 103 aa8.3□□□□□ -1.08
CPNE1-222ENST00000473373 DAD1P61803 113 aa8.3□□□□□ -1.08
CPNE1-222ENST00000473373 MORN5Q5VZ52 161 aa8.3□□□□□ -1.08
CPNE1-222ENST00000473373 NIPSNAP3BQ9BS92 247 aa8.3□□□□□ -1.08
CPNE1-222ENST00000473373 PCLOQ9Y6V0 5065 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms