RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 Q6ZTC4 211 aa16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 LRRC20Q8TCA0 184 aa16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 TRAV10A0A0B4J240 114 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 CXCL2P19875 107 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 TCTAP57738 103 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 PRR20EP86478 221 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 PRR20CP86479 221 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 PRR20DP86480 221 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 PRR20BP86481 221 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 PRR20AP86496 221 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 BAXQ07812 192 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 ATP6V1FQ16864 119 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 MIC13Q5XKP0 118 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 BPIFA4PQ86YQ2 179 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 MARVELD1Q9BSK0 173 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 NMES1Q9C002 83 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 RFNGQ9Y644 331 aa16.21■□□□□ 0.19
PTP4A1-203ENST00000473334 TMEM189A5PLL7 270 aa16.2■□□□□ 0.18
PTP4A1-203ENST00000473334 AMBPP02760 352 aa16.2■□□□□ 0.18
PTP4A1-203ENST00000473334 RLN2P04090 185 aa16.2■□□□□ 0.18
PTP4A1-203ENST00000473334 PSG3Q16557 428 aa16.2■□□□□ 0.18
PTP4A1-203ENST00000473334 LCN15Q6UWW0 184 aa16.2■□□□□ 0.18
PTP4A1-203ENST00000473334 C1orf158Q8N1D5 194 aa16.2■□□□□ 0.18
PTP4A1-203ENST00000473334 OR11H7Q8NGC8 314 aa16.2■□□□□ 0.18
PTP4A1-203ENST00000473334 OR1L4Q8NGR5 311 aa16.2■□□□□ 0.18
PTP4A1-203ENST00000473334 DNAJC4Q9NNZ3 241 aa16.2■□□□□ 0.18
PTP4A1-203ENST00000473334 RPL29P47914 159 aaKnown RBP16.19■□□□□ 0.18
PTP4A1-203ENST00000473334 OPCMLQ14982 345 aa16.19■□□□□ 0.18
PTP4A1-203ENST00000473334 MORN5Q5VZ52 161 aa16.19■□□□□ 0.18
PTP4A1-203ENST00000473334 LGALS9CQ6DKI2 356 aa16.19■□□□□ 0.18
PTP4A1-203ENST00000473334 IGF2BP2-AS1Q96M15 143 aa16.19■□□□□ 0.18
PTP4A1-203ENST00000473334 PFDN5Q99471 154 aa16.19■□□□□ 0.18
PTP4A1-203ENST00000473334 SLC50A1Q9BRV3 221 aa16.19■□□□□ 0.18
PTP4A1-203ENST00000473334 IGLL5B9A064 214 aa16.18■□□□□ 0.18
PTP4A1-203ENST00000473334 E5RGE8 158 aa16.18■□□□□ 0.18
PTP4A1-203ENST00000473334 FGF7P21781 194 aa16.18■□□□□ 0.18
PTP4A1-203ENST00000473334 B2MP61769 119 aa16.18■□□□□ 0.18
PTP4A1-203ENST00000473334 CYCSP99999 105 aaKnown RBP16.18■□□□□ 0.18
PTP4A1-203ENST00000473334 C12orf74Q32Q52 190 aa16.18■□□□□ 0.18
PTP4A1-203ENST00000473334 CHAC2Q8WUX2 184 aa16.18■□□□□ 0.18
PTP4A1-203ENST00000473334 ZNF331Q9NQX6 463 aaPredicted RBP16.18■□□□□ 0.18
PTP4A1-203ENST00000473334 SLC39A9Q9NUM3 307 aa16.18■□□□□ 0.18
PTP4A1-203ENST00000473334 HBE1P02100 147 aa16.17■□□□□ 0.18
PTP4A1-203ENST00000473334 HIST1H1AQ02539 215 aaPredicted RBP16.17■□□□□ 0.18
PTP4A1-203ENST00000473334 SPINK13Q1W4C9 94 aa16.17■□□□□ 0.18
PTP4A1-203ENST00000473334 LRRC37A5PQ49AS3 106 aa16.17■□□□□ 0.18
PTP4A1-203ENST00000473334 ZNF767PQ75MW2 155 aa16.17■□□□□ 0.18
PTP4A1-203ENST00000473334 OR8A1Q8NGG7 326 aa16.17■□□□□ 0.18
PTP4A1-203ENST00000473334 SLC25A31Q9H0C2 315 aa16.17■□□□□ 0.18
PTP4A1-203ENST00000473334 M0R2Z0 102 aa16.16■□□□□ 0.18
PTP4A1-203ENST00000473334 MPDU1O75352 247 aa16.16■□□□□ 0.18
PTP4A1-203ENST00000473334 SNRPCP09234 159 aaKnown RBP16.16■□□□□ 0.18
PTP4A1-203ENST00000473334 SPART-AS1P0CW21 52 aa16.16■□□□□ 0.18
PTP4A1-203ENST00000473334 EMP1P54849 157 aa16.16■□□□□ 0.18
PTP4A1-203ENST00000473334 TMEM208Q9BTX3 173 aa16.16■□□□□ 0.18
PTP4A1-203ENST00000473334 OR5AC2Q9NZP5 309 aa16.16■□□□□ 0.18
PTP4A1-203ENST00000473334 APLNQ9ULZ1 77 aa16.16■□□□□ 0.18
PTP4A1-203ENST00000473334 PXMP4Q9Y6I8 212 aa16.16■□□□□ 0.18
PTP4A1-203ENST00000473334 EPPK1P58107 5090 aaKnown RBP16.15■□□□□ 0.18
PTP4A1-203ENST00000473334 BOLA2-SMG1P6H3BVE0 249 aa16.15■□□□□ 0.18
PTP4A1-203ENST00000473334 CRXO43186 299 aaPredicted RBP16.15■□□□□ 0.18
PTP4A1-203ENST00000473334 INSP01308 110 aa16.15■□□□□ 0.18
PTP4A1-203ENST00000473334 IGLC2P0DOY2 106 aa16.15■□□□□ 0.18
PTP4A1-203ENST00000473334 NHLH2Q02577 135 aa16.15■□□□□ 0.18
PTP4A1-203ENST00000473334 RRN3P1Q2M238 152 aa16.15■□□□□ 0.18
PTP4A1-203ENST00000473334 RPUSD4Q96CM3 377 aaKnown RBP16.15■□□□□ 0.18
PTP4A1-203ENST00000473334 TEX48A0A1B0GUV7 120 aa16.14■□□□□ 0.17
PTP4A1-203ENST00000473334 LOC102723971A0A1B0GUV8 181 aa16.14■□□□□ 0.17
PTP4A1-203ENST00000473334 H0YIZ8 118 aa16.14■□□□□ 0.17
PTP4A1-203ENST00000473334 SSNA1O43805 119 aa16.14■□□□□ 0.17
PTP4A1-203ENST00000473334 H2BFSP57053 126 aa16.14■□□□□ 0.17
PTP4A1-203ENST00000473334 RHOBP62745 196 aa16.14■□□□□ 0.17
PTP4A1-203ENST00000473334 OR5C1Q8NGR4 320 aa16.14■□□□□ 0.17
PTP4A1-203ENST00000473334 KMT2AQ03164 3969 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 DEFB131BA0A096LNP1 70 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 TRAV5A0A0B4J249 113 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 H3BTX0 84 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 SLC17A3O00476 420 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 RNF126Q9BV68 326 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 NPCDR1Q9BY65 106 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 PPP1R14DQ9NXH3 145 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 DKK2Q9UBU2 259 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 VPS13DQ5THJ4 4388 aa16.13■□□□□ 0.17
PTP4A1-203ENST00000473334 IGHV4-4A0A075B6R2 117 aa16.12■□□□□ 0.17
PTP4A1-203ENST00000473334 H3BQ15 152 aa16.12■□□□□ 0.17
PTP4A1-203ENST00000473334 GUK1Q16774 197 aa16.12■□□□□ 0.17
PTP4A1-203ENST00000473334 BAP18Q8IXM2 172 aa16.12■□□□□ 0.17
PTP4A1-203ENST00000473334 PPP1R1CQ8WVI7 109 aa16.12■□□□□ 0.17
PTP4A1-203ENST00000473334 SAT2Q96F10 170 aaPredicted RBP16.12■□□□□ 0.17
PTP4A1-203ENST00000473334 PRB4P10163 310 aaPredicted RBP16.11■□□□□ 0.17
PTP4A1-203ENST00000473334 FAM222AQ5U5X8 452 aa16.11■□□□□ 0.17
PTP4A1-203ENST00000473334 THAP6Q8TBB0 222 aa16.11■□□□□ 0.17
PTP4A1-203ENST00000473334 YTHDF2Q9Y5A9 579 aaKnown RBP16.11■□□□□ 0.17
PTP4A1-203ENST00000473334 TRAV12-2A0A075B6T6 113 aa16.1■□□□□ 0.17
PTP4A1-203ENST00000473334 PET100P0DJ07 73 aa16.1■□□□□ 0.17
PTP4A1-203ENST00000473334 CLINT1Q14677 625 aa16.1■□□□□ 0.17
PTP4A1-203ENST00000473334 NIPSNAP3BQ9BS92 247 aa16.1■□□□□ 0.17
PTP4A1-203ENST00000473334 ZNF253O75346 499 aa16.09■□□□□ 0.17
PTP4A1-203ENST00000473334 RPP25LQ8N5L8 163 aaKnown RBP16.09■□□□□ 0.17
PTP4A1-203ENST00000473334 ZNF586Q9NXT0 402 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms