RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 PSG3Q16557 428 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 PXDC1Q5TGL8 231 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 TMEM88Q6PEY1 159 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 ZNF546Q86UE3 836 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 OR8A1Q8NGG7 326 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 GGACTQ9BVM4 153 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 C20orf85Q9H1P6 137 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 PPP1R14DQ9NXH3 145 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 PKHD1P08F94 4074 aa15.97■□□□□ 0.15
C9orf3-213ENST00000471978 AGPAT2O15120 278 aa15.96■□□□□ 0.15
C9orf3-213ENST00000471978 LYRM9A8MSI8 78 aa15.95■□□□□ 0.14
C9orf3-213ENST00000471978 CCSO14618 274 aa15.95■□□□□ 0.14
C9orf3-213ENST00000471978 MRPS12O15235 138 aaKnown RBP15.95■□□□□ 0.14
C9orf3-213ENST00000471978 PLA2G10O15496 165 aa15.95■□□□□ 0.14
C9orf3-213ENST00000471978 ZNF846Q147U1 533 aa15.95■□□□□ 0.14
C9orf3-213ENST00000471978 LGALS9BQ3B8N2 356 aa15.95■□□□□ 0.14
C9orf3-213ENST00000471978 LINC00305Q7Z4B0 112 aa15.95■□□□□ 0.14
C9orf3-213ENST00000471978 KIAA1109Q2LD37 5005 aa15.94■□□□□ 0.14
C9orf3-213ENST00000471978 IGLV2-18A0A075B6J9 118 aa15.94■□□□□ 0.14
C9orf3-213ENST00000471978 L7N2F9 121 aa15.94■□□□□ 0.14
C9orf3-213ENST00000471978 RTL8CO15255 209 aa15.94■□□□□ 0.14
C9orf3-213ENST00000471978 LYRM1O43325 122 aa15.94■□□□□ 0.14
C9orf3-213ENST00000471978 PRB4P10163 310 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-213ENST00000471978 TSPOP30536 169 aa15.94■□□□□ 0.14
C9orf3-213ENST00000471978 VAMP2P63027 116 aa15.94■□□□□ 0.14
C9orf3-213ENST00000471978 RNF212Q495C1 297 aa15.94■□□□□ 0.14
C9orf3-213ENST00000471978 RPUSD4Q96CM3 377 aaKnown RBP15.94■□□□□ 0.14
C9orf3-213ENST00000471978 LINC01587Q99440 93 aa15.94■□□□□ 0.14
C9orf3-213ENST00000471978 PRSS29PA6NIE9 313 aa15.93■□□□□ 0.14
C9orf3-213ENST00000471978 FAM25EA8MYX2 175 aa15.93■□□□□ 0.14
C9orf3-213ENST00000471978 COX7A2P2O60397 106 aa15.93■□□□□ 0.14
C9orf3-213ENST00000471978 CXCL2P19875 107 aa15.93■□□□□ 0.14
C9orf3-213ENST00000471978 AZU1P20160 251 aa15.93■□□□□ 0.14
C9orf3-213ENST00000471978 MGST2Q99735 147 aa15.93■□□□□ 0.14
C9orf3-213ENST00000471978 PKD1P98161 4303 aa15.93■□□□□ 0.14
C9orf3-213ENST00000471978 TRAV6A0A075B6T7 132 aa15.92■□□□□ 0.14
C9orf3-213ENST00000471978 A0A1B0GVY2 172 aa15.92■□□□□ 0.14
C9orf3-213ENST00000471978 SNRPCP09234 159 aaKnown RBP15.92■□□□□ 0.14
C9orf3-213ENST00000471978 DEFB130BP0DP73 79 aa15.92■□□□□ 0.14
C9orf3-213ENST00000471978 DEFB130AP0DP74 79 aa15.92■□□□□ 0.14
C9orf3-213ENST00000471978 LCN15Q6UWW0 184 aa15.92■□□□□ 0.14
C9orf3-213ENST00000471978 BPIFA4PQ86YQ2 179 aa15.92■□□□□ 0.14
C9orf3-213ENST00000471978 TMEM256Q8N2U0 113 aa15.92■□□□□ 0.14
C9orf3-213ENST00000471978 LSM5Q9Y4Y9 91 aaKnown RBP15.92■□□□□ 0.14
C9orf3-213ENST00000471978 PLAC8L1A1L4L8 177 aa15.91■□□□□ 0.14
C9orf3-213ENST00000471978 TCRBP04435 133 aa15.91■□□□□ 0.14
C9orf3-213ENST00000471978 BCAP31P51572 246 aa15.91■□□□□ 0.14
C9orf3-213ENST00000471978 FCN2Q15485 313 aa15.91■□□□□ 0.14
C9orf3-213ENST00000471978 TMEM37Q8WXS4 190 aa15.91■□□□□ 0.14
C9orf3-213ENST00000471978 SLC50A1Q9BRV3 221 aa15.91■□□□□ 0.14
C9orf3-213ENST00000471978 ZNF331Q9NQX6 463 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-213ENST00000471978 C5orf51A6NDU8 294 aa15.9■□□□□ 0.14
C9orf3-213ENST00000471978 HTN1P15515 57 aa15.9■□□□□ 0.14
C9orf3-213ENST00000471978 CDKN1BP46527 198 aa15.9■□□□□ 0.14
C9orf3-213ENST00000471978 CAV2P51636 162 aa15.9■□□□□ 0.14
C9orf3-213ENST00000471978 TAS2R60P59551 318 aa15.9■□□□□ 0.14
C9orf3-213ENST00000471978 C15orf53Q8NAA6 179 aa15.9■□□□□ 0.14
C9orf3-213ENST00000471978 ZNF431Q8TF32 576 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-213ENST00000471978 SEC22CQ9BRL7 303 aa15.9■□□□□ 0.14
C9orf3-213ENST00000471978 KRTAP17-1Q9BYP8 105 aa15.9■□□□□ 0.14
C9orf3-213ENST00000471978 CAMLGP49069 296 aa15.89■□□□□ 0.13
C9orf3-213ENST00000471978 RAB31Q13636 194 aa15.89■□□□□ 0.13
C9orf3-213ENST00000471978 MORN5Q5VZ52 161 aa15.89■□□□□ 0.13
C9orf3-213ENST00000471978 C10orf113Q5VZT2 155 aa15.89■□□□□ 0.13
C9orf3-213ENST00000471978 Q6ZR54 194 aa15.89■□□□□ 0.13
C9orf3-213ENST00000471978 NUDT15Q9NV35 164 aa15.89■□□□□ 0.13
C9orf3-213ENST00000471978 H3BTX0 84 aa15.88■□□□□ 0.13
C9orf3-213ENST00000471978 CST7O76096 145 aa15.88■□□□□ 0.13
C9orf3-213ENST00000471978 OPCMLQ14982 345 aa15.88■□□□□ 0.13
C9orf3-213ENST00000471978 NRARPQ7Z6K4 114 aa15.88■□□□□ 0.13
C9orf3-213ENST00000471978 C16orf74Q96GX8 76 aa15.88■□□□□ 0.13
C9orf3-213ENST00000471978 F5H768 121 aa15.87■□□□□ 0.13
C9orf3-213ENST00000471978 SLC17A3O00476 420 aa15.87■□□□□ 0.13
C9orf3-213ENST00000471978 Q6ZRG5 221 aa15.87■□□□□ 0.13
C9orf3-213ENST00000471978 C12orf45Q8N5I9 185 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-213ENST00000471978 C2orf50Q96LR7 162 aa15.87■□□□□ 0.13
C9orf3-213ENST00000471978 DNAJC4Q9NNZ3 241 aa15.87■□□□□ 0.13
C9orf3-213ENST00000471978 NDUFA13Q9P0J0 144 aa15.87■□□□□ 0.13
C9orf3-213ENST00000471978 FAM24AA6NFZ4 105 aa15.86■□□□□ 0.13
C9orf3-213ENST00000471978 IGLC2P0DOY2 106 aa15.86■□□□□ 0.13
C9orf3-213ENST00000471978 MIC13Q5XKP0 118 aa15.86■□□□□ 0.13
C9orf3-213ENST00000471978 OR10J6PQ8NGY7 276 aa15.86■□□□□ 0.13
C9orf3-213ENST00000471978 C11orf1Q9H5F2 150 aa15.86■□□□□ 0.13
C9orf3-213ENST00000471978 UQCC1Q9NVA1 299 aa15.86■□□□□ 0.13
C9orf3-213ENST00000471978 PXMP4Q9Y6I8 212 aa15.86■□□□□ 0.13
C9orf3-213ENST00000471978 CBY3A6NI87 242 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 PRAC2D3DTV9 90 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 H3BQ15 152 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 ATP5G1P05496 136 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 H2AFB2P0C5Z0 115 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 PVALBP20472 110 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-213ENST00000471978 ATP5G3P48201 142 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 ZNF493Q6ZR52 646 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 ATG101Q9BSB4 218 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 WDR83OSQ9Y284 106 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 TIMM8BQ9Y5J9 83 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-213ENST00000471978 DYNC1H1Q14204 4646 aaKnown RBP15.85■□□□□ 0.13
C9orf3-213ENST00000471978 DNAH11Q96DT5 4516 aa15.85■□□□□ 0.13
C9orf3-213ENST00000471978 NACAE9PAV3 2078 aa15.84■□□□□ 0.13
C9orf3-213ENST00000471978 TRAV5A0A0B4J249 113 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms