RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 HBBP68871 147 aa13.69□□□□□ -0.22
RRP1-202ENST00000471909 EBI3Q14213 229 aa13.69□□□□□ -0.22
RRP1-202ENST00000471909 KLF17Q5JT82 389 aaPredicted RBP13.69□□□□□ -0.22
RRP1-202ENST00000471909 ZNF562Q6V9R5 426 aa13.69□□□□□ -0.22
RRP1-202ENST00000471909 C7orf69Q9H7B7 122 aa13.69□□□□□ -0.22
RRP1-202ENST00000471909 VWC2LB2RUY7 222 aa13.68□□□□□ -0.22
RRP1-202ENST00000471909 IGKV1-17P01599 117 aa13.68□□□□□ -0.22
RRP1-202ENST00000471909 STXBP6Q8NFX7 210 aa13.68□□□□□ -0.22
RRP1-202ENST00000471909 URB1-AS1Q96HZ7 61 aa13.68□□□□□ -0.22
RRP1-202ENST00000471909 AJUBAQ96IF1 538 aa13.68□□□□□ -0.22
RRP1-202ENST00000471909 ST20Q9HBF5 79 aa13.68□□□□□ -0.22
RRP1-202ENST00000471909 NDPQ00604 133 aa13.68□□□□□ -0.22
RRP1-202ENST00000471909 VAMP3Q15836 100 aa13.68□□□□□ -0.22
RRP1-202ENST00000471909 PRR31Q5SQ13 230 aa13.68□□□□□ -0.22
RRP1-202ENST00000471909 FLNCQ14315 2725 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 SH2D7A6NKC9 451 aaPredicted RBP13.67□□□□□ -0.22
RRP1-202ENST00000471909 SLC25A5P05141 298 aaKnown RBP13.67□□□□□ -0.22
RRP1-202ENST00000471909 MYCNOSP40205 109 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 UBE2E1P51965 193 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 FAM120AOSQ5T036 256 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 TCF24Q7RTU0 167 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 RASL11BQ9BPW5 248 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 CDKN1BP46527 198 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 LYZP61626 148 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 ARPC1AQ92747 370 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 SGK494Q96LW2 274 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 EPDR1Q9UM22 224 aa13.67□□□□□ -0.22
RRP1-202ENST00000471909 VPS13CQ709C8 3753 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 CRXO43186 299 aaPredicted RBP13.66□□□□□ -0.22
RRP1-202ENST00000471909 GP9P14770 177 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 TMEM11P17152 192 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 FOXA3P55318 350 aaPredicted RBP13.66□□□□□ -0.22
RRP1-202ENST00000471909 BLNKQ8WV28 456 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 RPP21Q9H633 154 aaKnown RBP13.66□□□□□ -0.22
RRP1-202ENST00000471909 C1RLQ9NZP8 487 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 SYS1-DBNDD2H3BUS1 97 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 M0QZ24 198 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 MPV17L2Q567V2 206 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 CHCHD1Q96BP2 118 aaKnown RBP13.66□□□□□ -0.22
RRP1-202ENST00000471909 SMIM12Q96EX1 92 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 TP73-AS1Q9UF72 201 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 RPH3ALQ9UNE2 315 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 HIGD1AQ9Y241 93 aa13.66□□□□□ -0.22
RRP1-202ENST00000471909 TRAV30A0A087WSZ9 112 aa13.65□□□□□ -0.22
RRP1-202ENST00000471909 IGHV1-24A0A0C4DH33 117 aa13.65□□□□□ -0.22
RRP1-202ENST00000471909 NBEAP1P0C6P0 100 aa13.65□□□□□ -0.22
RRP1-202ENST00000471909 GPR82Q96P67 336 aa13.65□□□□□ -0.22
RRP1-202ENST00000471909 FANCD2OSQ96PS1 177 aa13.65□□□□□ -0.22
RRP1-202ENST00000471909 NPIPB5A8MRT5 1133 aa13.65□□□□□ -0.22
RRP1-202ENST00000471909 A8MWL6 223 aa13.65□□□□□ -0.22
RRP1-202ENST00000471909 LEPROTL1O95214 131 aa13.65□□□□□ -0.22
RRP1-202ENST00000471909 SAA4P35542 130 aa13.64□□□□□ -0.23
RRP1-202ENST00000471909 SOX21Q9Y651 276 aaPredicted RBP13.64□□□□□ -0.23
RRP1-202ENST00000471909 S4R3C0 116 aa13.64□□□□□ -0.23
RRP1-202ENST00000471909 IGLV11-55A0A075B6I3 123 aa13.64□□□□□ -0.23
RRP1-202ENST00000471909 hDV102S1A0JD36 115 aa13.64□□□□□ -0.23
RRP1-202ENST00000471909 PGPA6NDG6 321 aa13.64□□□□□ -0.23
RRP1-202ENST00000471909 HSBP1L1C9JCN9 74 aa13.64□□□□□ -0.23
RRP1-202ENST00000471909 SLC25A39Q9BZJ4 359 aaPredicted RBP13.64□□□□□ -0.23
RRP1-202ENST00000471909 KLF12Q9Y4X4 402 aa13.64□□□□□ -0.23
RRP1-202ENST00000471909 P01737 135 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 FAM106CPP0CH98 169 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 SLC25A34Q6PIV7 304 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 LINC00173Q6ZV60 143 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 TTC9CQ8N5M4 171 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 PGLYRP4Q96LB8 373 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 TMEM191AQ9H0A3 160 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 H3BTX0 84 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 NUDT3O95989 172 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 CT83Q5H943 113 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 Q8N9W7 124 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 GTSF1Q8WW33 167 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 DOPEY1Q5JWR5 2465 aa13.63□□□□□ -0.23
RRP1-202ENST00000471909 USP9XQ93008 2570 aaPredicted RBP13.63□□□□□ -0.23
RRP1-202ENST00000471909 IGHV7-81A0A0B4J1V7 117 aa13.62□□□□□ -0.23
RRP1-202ENST00000471909 EGR2P11161 476 aaPredicted RBP13.62□□□□□ -0.23
RRP1-202ENST00000471909 RNF151Q2KHN1 245 aa13.62□□□□□ -0.23
RRP1-202ENST00000471909 ERASQ7Z444 233 aa13.62□□□□□ -0.23
RRP1-202ENST00000471909 PIP4P2Q8N4L2 257 aa13.62□□□□□ -0.23
RRP1-202ENST00000471909 MLST8Q9BVC4 326 aa13.62□□□□□ -0.23
RRP1-202ENST00000471909 PRSS22Q9GZN4 317 aa13.62□□□□□ -0.23
RRP1-202ENST00000471909 LINC00322Q6ZN03 302 aaPredicted RBP13.62□□□□□ -0.23
RRP1-202ENST00000471909 CCL19Q99731 98 aa13.62□□□□□ -0.23
RRP1-202ENST00000471909 BVES-AS1Q5T3Y7 98 aa13.61□□□□□ -0.23
RRP1-202ENST00000471909 TAX1BP3O14907 124 aa13.61□□□□□ -0.23
RRP1-202ENST00000471909 RHOGP84095 191 aa13.61□□□□□ -0.23
RRP1-202ENST00000471909 RBPMS2Q6ZRY4 209 aaKnown RBP13.61□□□□□ -0.23
RRP1-202ENST00000471909 ZNF491Q8N8L2 437 aa13.61□□□□□ -0.23
RRP1-202ENST00000471909 DAZAP1Q96EP5 407 aaKnown RBP13.61□□□□□ -0.23
RRP1-202ENST00000471909 FMC1Q96HJ9 113 aa13.61□□□□□ -0.23
RRP1-202ENST00000471909 ZNF492Q9P255 531 aa13.61□□□□□ -0.23
RRP1-202ENST00000471909 PRSS47A8MTI9 375 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 F8W735 103 aaPredicted RBP13.6□□□□□ -0.23
RRP1-202ENST00000471909 CHEK1O14757 476 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 MAP1LC3CQ9BXW4 147 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 CENPVL3A0A0U1RRI6 287 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 NPFFO15130 113 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 OR5AL1P0C617 328 aa13.6□□□□□ -0.23
RRP1-202ENST00000471909 C5orf17Q8NAS9 161 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms