RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 UBE2WQ96B02 151 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 SRSF8Q9BRL6 282 aaKnown RBP6.91□□□□□ -1.3
CD47-204ENST00000471694 SMIM2Q9BVW6 85 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 RNASE7Q9H1E1 156 aaKnown RBP6.91□□□□□ -1.3
CD47-204ENST00000471694 GBF1Q92538 1859 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 RHODO00212 210 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 A0A1B0GW64 132 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 A0A087WV48 116 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 TRAV3A0A0B4J244 114 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 TRPT1Q86TN4 253 aaKnown RBP6.91□□□□□ -1.3
CD47-204ENST00000471694 RPP25LQ8N5L8 163 aaKnown RBP6.91□□□□□ -1.3
CD47-204ENST00000471694 RCC1LQ96I51 464 aaKnown RBP6.91□□□□□ -1.3
CD47-204ENST00000471694 ABCA4P78363 2273 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 SHISA3A0PJX4 238 aa6.9□□□□□ -1.3
CD47-204ENST00000471694 CBLN2Q8IUK8 224 aa6.9□□□□□ -1.3
CD47-204ENST00000471694 DOCK4Q8N1I0 1966 aa6.9□□□□□ -1.3
CD47-204ENST00000471694 SNAI2O43623 268 aa6.9□□□□□ -1.3
CD47-204ENST00000471694 WT1P19544 449 aaPredicted RBP6.9□□□□□ -1.3
CD47-204ENST00000471694 APRG1Q8IVJ8 170 aa6.9□□□□□ -1.3
CD47-204ENST00000471694 C10orf105Q8TEF2 133 aa6.9□□□□□ -1.3
CD47-204ENST00000471694 IGHV1OR15-1A0A075B7D0 117 aa6.9□□□□□ -1.3
CD47-204ENST00000471694 SHISA9B4DS77 424 aa6.9□□□□□ -1.3
CD47-204ENST00000471694 TCRAP04437 139 aa6.9□□□□□ -1.3
CD47-204ENST00000471694 LGALS1P09382 135 aaKnown RBP6.9□□□□□ -1.3
CD47-204ENST00000471694 TRAV25A0A0B4J276 109 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 LRCOL1A6NCL2 159 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 LDLRAD4O15165 306 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 PLP1P60201 277 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 Q8TCH9 128 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 DPM2O94777 84 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 PFN1P07737 140 aaKnown RBP6.9□□□□□ -1.31
CD47-204ENST00000471694 PLA2G2AP14555 144 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 CDKN1BP46527 198 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 FOXE3Q13461 319 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 RBMY1FQ15415 496 aaKnown RBP6.9□□□□□ -1.31
CD47-204ENST00000471694 SPATA31B1PQ5VZV4 182 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 TIMM17AQ99595 171 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 SEC16AO15027 2179 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 PMVKQ15126 192 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 PRIMA1Q86XR5 153 aa6.9□□□□□ -1.31
CD47-204ENST00000471694 FGF16O43320 207 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 PFN2P35080 140 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 MYCNOSP40205 109 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
CD47-204ENST00000471694 DMRT1Q9Y5R6 373 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 VWC2LB2RUY7 222 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 LY6G6CO95867 125 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 PPBPP02775 128 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 A8MWV9 139 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 ESM1Q9NQ30 184 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 HEATR1Q9H583 2144 aaKnown RBP6.89□□□□□ -1.31
CD47-204ENST00000471694 GPHB5Q86YW7 130 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 SPAG8Q99932 426 aaPredicted RBP6.89□□□□□ -1.31
CD47-204ENST00000471694 ZNF319Q9P2F9 582 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 FER1L5A0AVI2 2057 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 NCR2O95944 276 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 ATP5G1P05496 136 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 UBE2AP49459 152 aa6.89□□□□□ -1.31
CD47-204ENST00000471694 LBHQ53QV2 105 aaPredicted RBP6.89□□□□□ -1.31
CD47-204ENST00000471694 IGKV1-9A0A0C4DH69 117 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 IGHV7-4-1A0A0J9YVY3 117 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 LY6G6DO95868 133 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 RTBDNQ9BSG5 229 aaPredicted RBP6.88□□□□□ -1.31
CD47-204ENST00000471694 DNAJC9-AS1A6NH13 148 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 ITGB1BP1O14713 200 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 NXPH4O95158 308 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 PLEKHB2Q96CS7 222 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 DEFB4AO15263 64 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 DANCRP0C864 163 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 DAZAP2Q15038 168 aaPredicted RBP6.88□□□□□ -1.31
CD47-204ENST00000471694 RHOHQ15669 191 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 MRPL23Q16540 153 aaKnown RBP6.88□□□□□ -1.31
CD47-204ENST00000471694 DEFB135Q30KP9 77 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 PRR25Q96S07 402 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 LINC01549A6NIU2 74 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 LINC00614P0C842 121 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 SFTA2Q6UW10 78 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 ATP5L2Q7Z4Y8 100 aa6.88□□□□□ -1.31
CD47-204ENST00000471694 BUB3O43684 328 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 HILS1P60008 231 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 LYZL1Q6UWQ5 148 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
CD47-204ENST00000471694 CITED2Q99967 270 aaPredicted RBP6.87□□□□□ -1.31
CD47-204ENST00000471694 SIGLEC8Q9NYZ4 499 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 C11orf45Q8TAV5 145 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 IMMP2LQ96T52 175 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 SPXQ9BT56 116 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 CD5LO43866 347 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 IGKCP01834 107 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 LIME1Q9H400 295 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 NPDC1Q9NQX5 325 aaPredicted RBP6.87□□□□□ -1.31
CD47-204ENST00000471694 A0A087X0M5 115 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 IGHV1-24A0A0C4DH33 117 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 IGKV1-12A0A0C4DH73 117 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 A0A1B0GX30 115 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 TYMSP04818 313 aa6.87□□□□□ -1.31
CD47-204ENST00000471694 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms