RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 PEMTQ9UBM1 199 aa7.35□□□□□ -1.23
SF3A1-207ENST00000471342 NBEAL1Q6ZS30 2694 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 TRAV2A0A0B4J234 112 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 TRAV25A0A0B4J276 109 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 FAM74A7A6NL05 159 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 A8MTW9 85 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 ZNF705EA8MWA4 302 aaPredicted RBP7.34□□□□□ -1.23
SF3A1-207ENST00000471342 ZNF253O75346 499 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 CD7P09564 240 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 H2AFB1P0C5Y9 115 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 C4BPBP20851 252 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 ZNF124Q15973 351 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 ZNF767PQ75MW2 155 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 OR8I2Q8N0Y5 310 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 GBGT1Q8N5D6 347 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 SFT2D1Q8WV19 159 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 PAXXQ9BUH6 204 aa7.34□□□□□ -1.23
SF3A1-207ENST00000471342 TEX46H3BTG2 121 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 M0R3E3 92 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 SAP30O75446 220 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 SCGB2A1O75556 95 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 CXorf1O96002 111 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 IGLV2-11P01706 119 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 RPL7P18124 248 aaKnown RBP7.33□□□□□ -1.24
SF3A1-207ENST00000471342 CD81P60033 236 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 C9orf66Q5T8R8 295 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 GDF5OSQ5U4N7 250 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 EIF5AL1Q6IS14 154 aaKnown RBP7.33□□□□□ -1.24
SF3A1-207ENST00000471342 LINC00322Q6ZN03 302 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-207ENST00000471342 BPIFA4PQ86YQ2 179 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 EXOC3-AS1Q8N2X6 119 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 RNF182Q8N6D2 247 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 OR2K2Q8NGT1 345 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 RARRES2Q99969 163 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 NRN1Q9NPD7 142 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 UBQLN2Q9UHD9 624 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 SORL1Q92673 2214 aa7.33□□□□□ -1.24
SF3A1-207ENST00000471342 A0A1B0GV50 99 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 A0A1W2PPV4 95 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 A0A1W2PS18 150 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 RBMY1BA6NDE4 496 aaKnown RBP7.32□□□□□ -1.24
SF3A1-207ENST00000471342 RBMY1EA6NEQ0 496 aaKnown RBP7.32□□□□□ -1.24
SF3A1-207ENST00000471342 ZNF705FA8MVS1 300 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-207ENST00000471342 IFNA7P01567 189 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 RBMY1DP0C7P1 496 aaKnown RBP7.32□□□□□ -1.24
SF3A1-207ENST00000471342 ATP5G3P48201 142 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 INSL3P51460 131 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 ICAM4Q14773 271 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 KHDC3LQ587J8 217 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 ZNF575Q86XF7 245 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 TVP23CQ96ET8 276 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 FAM19A4Q96LR4 140 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 GPR82Q96P67 336 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 SPAG8Q99932 426 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-207ENST00000471342 WFDC10AQ9H1F0 79 aa7.32□□□□□ -1.24
SF3A1-207ENST00000471342 NOTCH1P46531 2555 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 LOC102723971A0A1B0GUV8 181 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 A0A1W2PRE2 83 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 LINC00862A6NCI5 91 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 OR7C2O60412 319 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 PAGE4O60829 102 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 CD5P06127 495 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 GIG44P09565 113 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-207ENST00000471342 CD33P20138 364 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 PDE6HQ13956 83 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 HAGHQ16775 308 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 AMTNQ6UX39 209 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 Q9H3A6 140 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 MAP6D1Q9H9H5 199 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 MED9Q9NWA0 146 aa7.31□□□□□ -1.24
SF3A1-207ENST00000471342 IGKV3-7A0A075B6H7 116 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 HELTA6NFD8 242 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 F6UB75 175 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 GALR1P47211 349 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 PSMB3P49720 205 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 TAS2R45P59539 299 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 RANP62826 216 aaKnown RBP7.3□□□□□ -1.24
SF3A1-207ENST00000471342 UBE2L3P68036 154 aaKnown RBP7.3□□□□□ -1.24
SF3A1-207ENST00000471342 BLOC1S1P78537 153 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 GUK1Q16774 197 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 ZNF506Q5JVG8 444 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 STXBP6Q8NFX7 210 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 BLNKQ8WV28 456 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 GRAMD2BQ96HH9 432 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 LINC00479Q96M42 142 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 FAM210AQ96ND0 272 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 FAM110AQ9BQ89 295 aa7.3□□□□□ -1.24
SF3A1-207ENST00000471342 ISLRO14498 428 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 ZNF688P0C7X2 276 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 TFPI2P48307 235 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 GNG5P63218 68 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 PSG3Q16557 428 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 LCN12Q6JVE5 192 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 WFDC3Q8IUB2 231 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 LYPD1Q8N2G4 141 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 LRRC20Q8TCA0 184 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 C2CD4CQ8TF44 421 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 C11orf52Q96A22 123 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 MRPL53Q96EL3 112 aaKnown RBP7.29□□□□□ -1.24
SF3A1-207ENST00000471342 MCRIP2Q9BUT9 160 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms