RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 XAGE1AQ9HD64 81 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 Q9Y3F1 56 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 NUP210Q8TEM1 1887 aaPredicted RBP-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 TANC2Q9HCD6 1990 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 MYH8P13535 1937 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 MYOM3Q5VTT5 1437 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 ANKRD31Q8N7Z5 1873 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 KIAA1549Q9HCM3 1950 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 TRAV3A0A0B4J244 114 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 A0A1W2PPM0 123 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 DAPL1A0PJW8 107 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 C21orf140B9A014 251 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 CLDN25C9JDP6 229 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 K7ERQ8 282 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 AZIN1O14977 448 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 SLC22A1O15245 554 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 TOX3O15405 576 aaPredicted RBP-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 CNIH1O95406 144 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 BRI3O95415 125 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 MT1EP04732 61 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 SULT1A3P0DMM9 295 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 SULT1A4P0DMN0 295 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 CXCL2P19875 107 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 CXCL3P19876 107 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 MIPP30301 263 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 HAAOP46952 286 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 DEFA5Q01523 94 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 STX3Q13277 289 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 GDF5OSQ5U4N7 250 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 FAM45BPQ6NSW5 357 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 LINC00322Q6ZN03 302 aaPredicted RBP-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 Q6ZS49 121 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 ANGPTL5Q86XS5 388 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 PHF13Q86YI8 300 aaPredicted RBP-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 UBE2DNLQ8IWF7 75 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 BLIDQ8IZY5 108 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 OR1M1Q8NGA1 313 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 OR5B17Q8NGF7 314 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 TMEM106AQ96A25 262 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 CCDC124Q96CT7 223 aaKnown RBP-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 CMTM5Q96DZ9 223 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 CYTH2Q99418 400 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 CCL13Q99616 98 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 LIMD2Q9BT23 127 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 OR8D2Q9GZM6 311 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 NSRP1Q9H0G5 558 aaKnown RBP-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 KLK9Q9UKQ9 250 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 PRELID1Q9Y255 219 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 RTL9Q8NET4 1388 aa-0.11□□□□□ -2.43
UBXN4-207ENST00000471246 NUP210LQ5VU65 1888 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 MYH7BA7E2Y1 1941 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 CITO14578 2027 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 TRAV17A0A0B4J275 112 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 TEX50A0A1B0GTY4 177 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 GOLGA8MH3BSY2 632 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 YPEL1O60688 119 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 APOMO95445 188 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 MT1AP04731 61 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 PIRTP0C851 137 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 HLA-DMBP28068 263 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 BRS3P32247 399 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 CSN1S1P47710 185 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 KCNJ3P48549 501 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 EFNA4P52798 201 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 POLR2GP62487 172 aaKnown RBP eCLIP-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 RPS24P62847 133 aaKnown RBP-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 HLA-DRB3P79483 266 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 EBPQ15125 230 aaKnown RBP-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 ESRGQ1W209 222 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 TDRG1Q3Y452 100 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 DNAL1Q4LDG9 190 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 FKBP1CQ5VVH2 108 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 Q6Q795 121 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 LCA10Q71F78 164 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 SSX8Q7RTT4 187 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 RIBC1Q8N443 379 aaPredicted RBP-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 LINC00471Q8N535 108 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 TBC1D19Q8N5T2 526 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 TMEM251Q8N6I4 163 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 ATP6V1C2Q8NEY4 427 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 OR51D1Q8NGF3 324 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 OR5AK3PQ8NH89 298 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 PATE1Q8WXA2 126 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 POP5Q969H6 163 aaKnown RBP-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 RBP7Q96R05 134 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 HES4Q9HCC6 221 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 HRASLSQ9HDD0 168 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 NIT2Q9NQR4 276 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 CISHQ9NSE2 258 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 FAIMQ9NVQ4 179 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 OPTCQ9UBM4 332 aa-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 RSL24D1Q9UHA3 163 aaKnown RBP-0.12□□□□□ -2.43
UBXN4-207ENST00000471246 PSME4Q14997 1843 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 WNK3Q9BYP7 1800 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 HEATR1Q9H583 2144 aaKnown RBP-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 MYH9P35579 1960 aaKnown RBP-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 ROCK2O75116 1388 aaKnown RBP-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 A0A087WTM6 91 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 TRAV10A0A0B4J240 114 aa-0.13□□□□□ -2.43
UBXN4-207ENST00000471246 DEFB108AA8MXU0 73 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms