RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 C2CD4CQ8TF44 421 aa13.49□□□□□ -0.25
MRPL28-208ENST00000469744 PRR25Q96S07 402 aa13.49□□□□□ -0.25
MRPL28-208ENST00000469744 PAXXQ9BUH6 204 aa13.49□□□□□ -0.25
MRPL28-208ENST00000469744 OR51M1Q9H341 326 aa13.49□□□□□ -0.25
MRPL28-208ENST00000469744 TRGV3P03979 118 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 LGALS1P09382 135 aaKnown RBP13.48□□□□□ -0.25
MRPL28-208ENST00000469744 IGLC1P0CG04 106 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 TTC9CQ8N5M4 171 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 DERL1Q9BUN8 251 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 K7EIM0 57 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 UBE2CO00762 179 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 GGCTO75223 188 aaKnown RBP13.48□□□□□ -0.25
MRPL28-208ENST00000469744 IGHV3-48P01763 117 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 UBE2L3P68036 154 aaKnown RBP13.48□□□□□ -0.25
MRPL28-208ENST00000469744 KCNIP4Q6PIL6 250 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 LINC00305Q7Z4B0 112 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 DLX4Q92988 240 aaPredicted RBP13.48□□□□□ -0.25
MRPL28-208ENST00000469744 SRD5A3Q9H8P0 318 aa13.48□□□□□ -0.25
MRPL28-208ENST00000469744 TRBV20OR9-2A0A075B6H5 130 aa13.47□□□□□ -0.25
MRPL28-208ENST00000469744 TRAV30A0A087WSZ9 112 aa13.47□□□□□ -0.25
MRPL28-208ENST00000469744 TRAV5A0A0B4J249 113 aa13.47□□□□□ -0.25
MRPL28-208ENST00000469744 LINC01619G3V211 115 aa13.47□□□□□ -0.25
MRPL28-208ENST00000469744 MORN5Q5VZ52 161 aa13.47□□□□□ -0.25
MRPL28-208ENST00000469744 OCC1Q8TAD7 63 aa13.47□□□□□ -0.25
MRPL28-208ENST00000469744 FXYD5Q96DB9 178 aa13.47□□□□□ -0.25
MRPL28-208ENST00000469744 SFRP2Q96HF1 295 aa13.47□□□□□ -0.25
MRPL28-208ENST00000469744 HELTA6NFD8 242 aa13.46□□□□□ -0.25
MRPL28-208ENST00000469744 GGTLC3B5MD39 225 aa13.46□□□□□ -0.25
MRPL28-208ENST00000469744 OVOL1O14753 267 aa13.46□□□□□ -0.25
MRPL28-208ENST00000469744 TYMSP04818 313 aa13.46□□□□□ -0.25
MRPL28-208ENST00000469744 RPL35P42766 123 aaKnown RBP13.46□□□□□ -0.25
MRPL28-208ENST00000469744 TAS2R60P59551 318 aa13.46□□□□□ -0.25
MRPL28-208ENST00000469744 SNRPEP62304 92 aaKnown RBP13.46□□□□□ -0.25
MRPL28-208ENST00000469744 KLK9Q2XQG4 91 aa13.46□□□□□ -0.25
MRPL28-208ENST00000469744 C19orf35Q6ZS72 473 aa13.46□□□□□ -0.25
MRPL28-208ENST00000469744 KLK9Q9UKQ9 250 aa13.46□□□□□ -0.25
MRPL28-208ENST00000469744 SORL1Q92673 2214 aa13.46□□□□□ -0.26
MRPL28-208ENST00000469744 IGLV11-55A0A075B6I3 123 aa13.45□□□□□ -0.26
MRPL28-208ENST00000469744 TRAV9-1A0A075B6T8 112 aa13.45□□□□□ -0.26
MRPL28-208ENST00000469744 OR10J4P0C629 311 aa13.45□□□□□ -0.26
MRPL28-208ENST00000469744 CRYBB3P26998 211 aa13.45□□□□□ -0.26
MRPL28-208ENST00000469744 SUMO1P63165 101 aaKnown RBP13.45□□□□□ -0.26
MRPL28-208ENST00000469744 OR1B1Q8NGR6 318 aa13.45□□□□□ -0.26
MRPL28-208ENST00000469744 ZMAT5Q9UDW3 170 aaKnown RBP13.45□□□□□ -0.26
MRPL28-208ENST00000469744 SAP30O75446 220 aa13.44□□□□□ -0.26
MRPL28-208ENST00000469744 ORM2P19652 201 aa13.44□□□□□ -0.26
MRPL28-208ENST00000469744 OR10G8Q8NGN5 311 aa13.44□□□□□ -0.26
MRPL28-208ENST00000469744 THYN1Q9P016 225 aa13.44□□□□□ -0.26
MRPL28-208ENST00000469744 TMEM14CQ9P0S9 112 aa13.44□□□□□ -0.26
MRPL28-208ENST00000469744 HIGD1AQ9Y241 93 aa13.44□□□□□ -0.26
MRPL28-208ENST00000469744 TOMM40O96008 361 aa13.43□□□□□ -0.26
MRPL28-208ENST00000469744 PSG1P11464 419 aa13.43□□□□□ -0.26
MRPL28-208ENST00000469744 GNG4P50150 75 aa13.43□□□□□ -0.26
MRPL28-208ENST00000469744 YPEL3P61236 119 aaPredicted RBP13.43□□□□□ -0.26
MRPL28-208ENST00000469744 S100A7AQ86SG5 101 aa13.43□□□□□ -0.26
MRPL28-208ENST00000469744 FANCD2OSQ96PS1 177 aa13.43□□□□□ -0.26
MRPL28-208ENST00000469744 ELOVL1Q9BW60 279 aa13.43□□□□□ -0.26
MRPL28-208ENST00000469744 PHOX2AO14813 284 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 IGKV1-17P01599 117 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 TRGC2P03986 189 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 RD3LP0DJH9 198 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 PYYP10082 97 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 HIST1H1BP16401 226 aaKnown RBP13.42□□□□□ -0.26
MRPL28-208ENST00000469744 MFAP4P55083 255 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 FAM3BP58499 235 aaPredicted RBP13.42□□□□□ -0.26
MRPL28-208ENST00000469744 TIGITQ495A1 244 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 TMEM68Q96MH6 324 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 B9D2Q9BPU9 175 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 MRPL27Q9P0M9 148 aaKnown RBP13.42□□□□□ -0.26
MRPL28-208ENST00000469744 ZNF256Q9Y2P7 627 aaPredicted RBP13.42□□□□□ -0.26
MRPL28-208ENST00000469744 DNAH9Q9NYC9 4486 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 IGHV3-21A0A0B4J1V1 117 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 PPP5D1E7EU14 171 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 H3BUA1 57 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 S100A8P05109 93 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 FCGR2BP31994 310 aaPredicted RBP13.42□□□□□ -0.26
MRPL28-208ENST00000469744 CENPWQ5EE01 88 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 LINC00518Q8N0U6 118 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 NECAP1Q8NC96 275 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 TXN2Q99757 166 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 RNF24Q9Y225 148 aa13.42□□□□□ -0.26
MRPL28-208ENST00000469744 PGPEP1LA6NFU8 196 aa13.41□□□□□ -0.26
MRPL28-208ENST00000469744 SCGB2A1O75556 95 aa13.41□□□□□ -0.26
MRPL28-208ENST00000469744 GCGP01275 180 aa13.41□□□□□ -0.26
MRPL28-208ENST00000469744 S100A9P06702 114 aaKnown RBP13.41□□□□□ -0.26
MRPL28-208ENST00000469744 NBEAP1P0C6P0 100 aa13.41□□□□□ -0.26
MRPL28-208ENST00000469744 GP9P14770 177 aa13.41□□□□□ -0.26
MRPL28-208ENST00000469744 HOXA5P20719 270 aa13.41□□□□□ -0.26
MRPL28-208ENST00000469744 INSL3P51460 131 aa13.41□□□□□ -0.26
MRPL28-208ENST00000469744 IGF2BP2-AS1Q96M15 143 aa13.41□□□□□ -0.26
MRPL28-208ENST00000469744 OSTCQ9NRP0 149 aa13.41□□□□□ -0.26
MRPL28-208ENST00000469744 K7EN84 100 aa13.4□□□□□ -0.26
MRPL28-208ENST00000469744 CNN1P51911 297 aaKnown RBP13.4□□□□□ -0.26
MRPL28-208ENST00000469744 FABP9Q0Z7S8 132 aa13.4□□□□□ -0.26
MRPL28-208ENST00000469744 SLC25A39Q9BZJ4 359 aaPredicted RBP13.4□□□□□ -0.26
MRPL28-208ENST00000469744 IL36BQ9NZH7 164 aa13.4□□□□□ -0.26
MRPL28-208ENST00000469744 A0A0G2JLM5 398 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 PEX7O00628 323 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST1H2BKO60814 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 TRBV12-3P01733 135 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms