RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 ABCA4P78363 2273 aa5.69□□□□□ -1.5
CD46-212ENST00000469535 YLPM1P49750 1951 aaKnown RBP5.69□□□□□ -1.5
CD46-212ENST00000469535 SMKR1H3BMG3 65 aa5.69□□□□□ -1.5
CD46-212ENST00000469535 LEPROTO15243 131 aa5.69□□□□□ -1.5
CD46-212ENST00000469535 SUMO4Q6EEV6 95 aa5.69□□□□□ -1.5
CD46-212ENST00000469535 K7EM74 188 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 C9orf66Q5T8R8 295 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 TSKUQ8WUA8 353 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 SERF1AO75920 110 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 ANGP03950 147 aaKnown RBP5.68□□□□□ -1.5
CD46-212ENST00000469535 STAG3L3P0CL85 134 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 PFN2P35080 140 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 DMRTC2Q8IXT2 367 aaPredicted RBP5.68□□□□□ -1.5
CD46-212ENST00000469535 WDR83OSQ9Y284 106 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 EP300Q09472 2414 aaPredicted RBP5.68□□□□□ -1.5
CD46-212ENST00000469535 HIST1H4AP62805 103 aaKnown RBP5.68□□□□□ -1.5
CD46-212ENST00000469535 NIT1Q86X76 327 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 RPP25LQ8N5L8 163 aaKnown RBP5.68□□□□□ -1.5
CD46-212ENST00000469535 IFI27L1Q96BM0 104 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 PNRC2Q9NPJ4 139 aaKnown RBP5.68□□□□□ -1.5
CD46-212ENST00000469535 RFNGQ9Y644 331 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 SPCS1Q9Y6A9 102 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 SPTBN2O15020 2390 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 ALPK2Q86TB3 2170 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 AKAP6Q13023 2319 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 SEC11AP67812 179 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 ZNF562Q6V9R5 426 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 C8orf86Q6ZUL3 223 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 ZNRF2Q8NHG8 242 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 OSTCQ9NRP0 149 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 DMRT1Q9Y5R6 373 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 TMEM238C9JI98 176 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 PIP4P1Q86T03 277 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 ZNF581Q9P0T4 197 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 LY6G6EA0A0G2JKS1 128 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 VWC2LB2RUY7 222 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 TMEM158Q8WZ71 300 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 SNHG12Q9BXW3 62 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 U3KQA8 63 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 FAM186AA6NE01 2351 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 A8MXK9 166 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 ITGB1BP1O14713 200 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 ATXN8Q156A1 80 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 VPREB3Q9UKI3 123 aa5.68□□□□□ -1.5
CD46-212ENST00000469535 NXPH4O95158 308 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 IGKV1-39P01597 117 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 IGKV1D-39P04432 117 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 WFDC1Q9HC57 220 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 PLEKHB2Q96CS7 222 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 ZNF48Q96MX3 618 aaPredicted RBP5.67□□□□□ -1.5
CD46-212ENST00000469535 LIME1Q9H400 295 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 ERG28Q9UKR5 140 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 HEATR1Q9H583 2144 aaKnown RBP5.67□□□□□ -1.5
CD46-212ENST00000469535 THSD7BQ9C0I4 1608 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 IGHV4-30-2A0A087WSY4 118 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 A0A1W2PPI3 338 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 H3BUT2 72 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 PMVKQ15126 192 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 POLEQ07864 2286 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 ARMS2P0C7Q2 107 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 TRPT1Q86TN4 253 aaKnown RBP5.67□□□□□ -1.5
CD46-212ENST00000469535 DERL1Q9BUN8 251 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 PI4KAP42356 2102 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 TRAV9-1A0A075B6T8 112 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 TRAV8-4A0A0B4J246 113 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 LAIR2Q6ISS4 152 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 TIMM21Q9BVV7 248 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 A0A1B0GUS0 222 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 KLF5Q13887 457 aaPredicted RBP5.67□□□□□ -1.5
CD46-212ENST00000469535 PIFOQ8TCI5 191 aa5.67□□□□□ -1.5
CD46-212ENST00000469535 GP9P14770 177 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 Q6ZQT7 251 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 SPOCK3Q9BQ16 436 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 KLF12Q9Y4X4 402 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 TRAV25A0A0B4J276 109 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 IGFBPL1Q8WX77 278 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 C8orf49Q96NF6 230 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 NOP10Q9NPE3 64 aaKnown RBP5.66□□□□□ -1.5
CD46-212ENST00000469535 PRSS29PA6NIE9 313 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 ID3Q02535 119 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 NHLRC3Q5JS37 347 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 RNF144BQ7Z419 303 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 MYMXA0A1B0GTQ4 84 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 F8W735 103 aaPredicted RBP5.66□□□□□ -1.5
CD46-212ENST00000469535 RNASE2P10153 161 aaKnown RBP5.66□□□□□ -1.5
CD46-212ENST00000469535 NTF4P34130 210 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 ZNF362Q5T0B9 420 aaPredicted RBP5.66□□□□□ -1.5
CD46-212ENST00000469535 TMEM243Q9BU79 118 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 RNF126Q9BV68 326 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 FAM215AQ9Y5M1 114 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 IGHV1OR15-1A0A075B7D0 117 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 DDTP30046 118 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 HOXB4P17483 251 aaPredicted RBP5.66□□□□□ -1.5
CD46-212ENST00000469535 PLA2G5P39877 138 aa5.66□□□□□ -1.5
CD46-212ENST00000469535 ZSWIM8A7E2V4 1837 aa5.65□□□□□ -1.5
CD46-212ENST00000469535 RNF222A6NCQ9 220 aa5.65□□□□□ -1.5
CD46-212ENST00000469535 FNDC4Q9H6D8 234 aaPredicted RBP5.65□□□□□ -1.5
CD46-212ENST00000469535 RPL18AQ02543 176 aaKnown RBP5.65□□□□□ -1.5
CD46-212ENST00000469535 ORAOV1Q8WV07 137 aa5.65□□□□□ -1.5
CD46-212ENST00000469535 SLURP1P55000 103 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms