RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 BPIFCQ8NFQ6 507 aa8.57□□□□□ -1.04
COL5A1-207ENST00000469093 TMEM147Q9BVK8 224 aa8.57□□□□□ -1.04
COL5A1-207ENST00000469093 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
COL5A1-207ENST00000469093 WRBO00258 174 aa8.56□□□□□ -1.04
COL5A1-207ENST00000469093 SYNGR2O43760 224 aa8.56□□□□□ -1.04
COL5A1-207ENST00000469093 IL5P05113 134 aa8.56□□□□□ -1.04
COL5A1-207ENST00000469093 ATP5G1P05496 136 aa8.56□□□□□ -1.04
COL5A1-207ENST00000469093 ATP5G3P48201 142 aa8.56□□□□□ -1.04
COL5A1-207ENST00000469093 CCL18P55774 89 aa8.56□□□□□ -1.04
COL5A1-207ENST00000469093 RPP30P78346 268 aaKnown RBP8.56□□□□□ -1.04
COL5A1-207ENST00000469093 FGL1Q08830 312 aa8.56□□□□□ -1.04
COL5A1-207ENST00000469093 MAPKAPK5-AS1Q8N8E1 139 aa8.56□□□□□ -1.04
COL5A1-207ENST00000469093 ZNF431Q8TF32 576 aaPredicted RBP8.56□□□□□ -1.04
COL5A1-207ENST00000469093 CIB3Q96Q77 187 aaPredicted RBP8.56□□□□□ -1.04
COL5A1-207ENST00000469093 LINC01587Q99440 93 aa8.56□□□□□ -1.04
COL5A1-207ENST00000469093 SLC25A39Q9BZJ4 359 aaPredicted RBP8.56□□□□□ -1.04
COL5A1-207ENST00000469093 S100A7P31151 101 aa8.55□□□□□ -1.04
COL5A1-207ENST00000469093 SPANXN5Q5MJ07 72 aa8.55□□□□□ -1.04
COL5A1-207ENST00000469093 ZNF738Q8NE65 137 aa8.55□□□□□ -1.04
COL5A1-207ENST00000469093 SEC22CQ9BRL7 303 aa8.55□□□□□ -1.04
COL5A1-207ENST00000469093 MARVELD1Q9BSK0 173 aa8.55□□□□□ -1.04
COL5A1-207ENST00000469093 SHANK2-AS3Q9BTD1 123 aa8.55□□□□□ -1.04
COL5A1-207ENST00000469093 H3BRN7 92 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 BOLA2-SMG1P6H3BVE0 249 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 SSNA1O43805 119 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 HTN1P15515 57 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 CXCL3P19876 107 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 TAS2R60P59551 318 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 RHOBP62745 196 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 AKR1C1Q04828 323 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 ACOT7LQ6ZUV0 252 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 TMEM144Q7Z5S9 345 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 TMEM256Q8N2U0 113 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 C12orf45Q8N5I9 185 aaPredicted RBP8.54□□□□□ -1.04
COL5A1-207ENST00000469093 OR8A1Q8NGG7 326 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 RNF141Q8WVD5 230 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 Q9H8V8 135 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 HSPG2P98160 4391 aa8.54□□□□□ -1.04
COL5A1-207ENST00000469093 H3BP45 60 aa8.53□□□□□ -1.04
COL5A1-207ENST00000469093 HOXB5P09067 269 aa8.53□□□□□ -1.04
COL5A1-207ENST00000469093 RPL7P18124 248 aaKnown RBP8.53□□□□□ -1.04
COL5A1-207ENST00000469093 HIST1H1AQ02539 215 aaPredicted RBP8.53□□□□□ -1.04
COL5A1-207ENST00000469093 PSG3Q16557 428 aa8.53□□□□□ -1.04
COL5A1-207ENST00000469093 CYP2G1PQ6ZSU1 146 aa8.53□□□□□ -1.04
COL5A1-207ENST00000469093 SSX7Q7RTT5 188 aa8.53□□□□□ -1.04
COL5A1-207ENST00000469093 MITD1Q8WV92 249 aa8.53□□□□□ -1.04
COL5A1-207ENST00000469093 STRAPQ9Y3F4 350 aaKnown RBP8.53□□□□□ -1.04
COL5A1-207ENST00000469093 TIMM8BQ9Y5J9 83 aaPredicted RBP8.53□□□□□ -1.04
COL5A1-207ENST00000469093 FAM25EA8MYX2 175 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 HYPMO75409 117 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 PRB4P10163 310 aaPredicted RBP8.52□□□□□ -1.05
COL5A1-207ENST00000469093 PLP1P60201 277 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 RAP2BP61225 183 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 ID3Q02535 119 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 CLINT1Q14677 625 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 Q8N1X5 172 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 C16orf74Q96GX8 76 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 UHRF2Q96PU4 802 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 NOP10Q9NPE3 64 aaKnown RBP8.52□□□□□ -1.05
COL5A1-207ENST00000469093 PPP1R14DQ9NXH3 145 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 HIGD1AQ9Y241 93 aa8.52□□□□□ -1.05
COL5A1-207ENST00000469093 A0A087X0K7 114 aa8.51□□□□□ -1.05
COL5A1-207ENST00000469093 C5orf51A6NDU8 294 aa8.51□□□□□ -1.05
COL5A1-207ENST00000469093 PMS2P5A8MQ11 134 aa8.51□□□□□ -1.05
COL5A1-207ENST00000469093 OR5G3P0C626 314 aa8.51□□□□□ -1.05
COL5A1-207ENST00000469093 CDKN1BP46527 198 aa8.51□□□□□ -1.05
COL5A1-207ENST00000469093 ZNF493Q6ZR52 646 aa8.51□□□□□ -1.05
COL5A1-207ENST00000469093 SPATA12Q7Z6I5 190 aa8.51□□□□□ -1.05
COL5A1-207ENST00000469093 RNASE8Q8TDE3 154 aaKnown RBP8.51□□□□□ -1.05
COL5A1-207ENST00000469093 KRTAP1-5Q9BYS1 174 aa8.51□□□□□ -1.05
COL5A1-207ENST00000469093 SMCO3A2RU48 225 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 MRPS12O15235 138 aaKnown RBP8.5□□□□□ -1.05
COL5A1-207ENST00000469093 LINC00869P0C866 280 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 POLR2GP62487 172 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL5A1-207ENST00000469093 OR5I1Q13606 314 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 KIR3DS1Q14943 382 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 PATE2Q6UY27 113 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 LINC00612Q8N6U2 182 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 LRRC20Q8TCA0 184 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 TMEM263Q8WUH6 116 aaKnown RBP8.5□□□□□ -1.05
COL5A1-207ENST00000469093 RPUSD4Q96CM3 377 aaKnown RBP8.5□□□□□ -1.05
COL5A1-207ENST00000469093 MED28Q9H204 178 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 SCRT2Q9NQ03 307 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 ALG5Q9Y673 324 aa8.5□□□□□ -1.05
COL5A1-207ENST00000469093 TRAV26-1A0A087WT03 109 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 C7orf66A4D0T2 115 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 H7BYZ3 331 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 GOSR2O14653 212 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 ADAP1O75689 374 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 KRTAP10-2P60368 255 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 SELENOTP62341 195 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 ESRGQ1W209 222 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 IAH1Q2TAA2 248 aaPredicted RBP8.49□□□□□ -1.05
COL5A1-207ENST00000469093 RXFP4Q8TDU9 374 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 GNPNAT1Q96EK6 184 aaPredicted RBP8.49□□□□□ -1.05
COL5A1-207ENST00000469093 ZNF503Q96F45 646 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 PSENENQ9NZ42 101 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 GSKIPQ9P0R6 139 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 LRP1BQ9NZR2 4599 aa8.49□□□□□ -1.05
COL5A1-207ENST00000469093 A0A0J9YY99 117 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms