RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 PPIAL4GP0DN37 164 aa12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 CHCHD1Q96BP2 118 aaKnown RBP12.51□□□□□ -0.41
TSPAN4-211ENST00000468468 MALRD1Q5VYJ5 2156 aa12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 IGHV1-24A0A0C4DH33 117 aa12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 FAM231BA6NCW3 169 aa12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 Q5PR19 223 aa12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 TPRP12270 2363 aaKnown RBP12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 CNIH1O95406 144 aa12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 ADORA2A-AS1P86434 159 aa12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 LINC00173Q6ZV60 143 aa12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 MEGF9Q9H1U4 602 aa12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 LRBAP50851 2863 aa12.5□□□□□ -0.41
TSPAN4-211ENST00000468468 IGKV1-17P01599 117 aa12.49□□□□□ -0.41
TSPAN4-211ENST00000468468 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
TSPAN4-211ENST00000468468 OR4C46A6NHA9 309 aa12.49□□□□□ -0.41
TSPAN4-211ENST00000468468 OR4F17Q8NGA8 305 aa12.49□□□□□ -0.41
TSPAN4-211ENST00000468468 C17orf77Q96MU5 243 aa12.49□□□□□ -0.41
TSPAN4-211ENST00000468468 NDFIP1Q9BT67 221 aa12.49□□□□□ -0.41
TSPAN4-211ENST00000468468 NCOR2Q9Y618 2525 aa12.48□□□□□ -0.41
TSPAN4-211ENST00000468468 HAX1O00165 279 aa12.48□□□□□ -0.41
TSPAN4-211ENST00000468468 LEPROTL1O95214 131 aa12.48□□□□□ -0.41
TSPAN4-211ENST00000468468 PRB4P10163 310 aaPredicted RBP12.48□□□□□ -0.41
TSPAN4-211ENST00000468468 AMMECR1LQ6DCA0 310 aa12.48□□□□□ -0.41
TSPAN4-211ENST00000468468 ASCL2Q99929 193 aa12.48□□□□□ -0.41
TSPAN4-211ENST00000468468 ANKHD1Q8IWZ3 2542 aaKnown RBP12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 TRBV19A0A075B6N1 114 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 SYS1-DBNDD2H3BUS1 97 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 APOHP02749 345 aaPredicted RBP12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 HOXB4P17483 251 aaPredicted RBP12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 ZNF138P52744 262 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 RHOGP84095 191 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 FBXL19-AS1Q494R0 122 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 BPIFA4PQ86YQ2 179 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 K7EIM0 57 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 CRXO43186 299 aaPredicted RBP12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 MUC15Q8N387 334 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 RNF5Q99942 180 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 SHANK2-AS3Q9BTD1 123 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 ONECUT1Q9UBC0 465 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 ABCA4P78363 2273 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 ZNF785A8K8V0 405 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 LY6LH3BQJ8 138 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 TAX1BP3O14907 124 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 TIMM23O14925 209 aa12.47□□□□□ -0.41
TSPAN4-211ENST00000468468 TRBV6-1A0A0K0K1D8 114 aa12.46□□□□□ -0.41
TSPAN4-211ENST00000468468 LY6DQ14210 128 aa12.46□□□□□ -0.41
TSPAN4-211ENST00000468468 MPV17L2Q567V2 206 aa12.46□□□□□ -0.41
TSPAN4-211ENST00000468468 C1RLQ9NZP8 487 aa12.46□□□□□ -0.41
TSPAN4-211ENST00000468468 DCHS2Q6V1P9 2916 aa12.46□□□□□ -0.41
TSPAN4-211ENST00000468468 H3BRN7 92 aa12.46□□□□□ -0.42
TSPAN4-211ENST00000468468 HTR1DP28221 377 aa12.46□□□□□ -0.42
TSPAN4-211ENST00000468468 A0A1B0GUT8 65 aa12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 CSN3P07498 182 aa12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 TMEM75Q8N9X5 138 aa12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 SRSF8Q9BRL6 282 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 PSG8Q9UQ74 426 aa12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 OVOL3O00110 214 aa12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 HLA-DRB1P01911 266 aa12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 LIPFP07098 398 aa12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 ARMS2P0C7Q2 107 aa12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 SIGLEC15Q6ZMC9 328 aa12.45□□□□□ -0.42
TSPAN4-211ENST00000468468 hDV102S1A0JD36 115 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 K7EQM0 130 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 IL4P05112 153 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 ZNF491Q8N8L2 437 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 HILPDAQ9Y5L2 63 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 S4R3C0 116 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 OR5AL1P0C617 328 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 RIGQ13278 110 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 ZNF672Q499Z4 452 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 IGFBPL1Q8WX77 278 aa12.44□□□□□ -0.42
TSPAN4-211ENST00000468468 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 K7ERU9 68 aa12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 LY6HO94772 140 aa12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 FCGR2BP31994 310 aaPredicted RBP12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 PSG3Q16557 428 aa12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 KLF17Q5JT82 389 aaPredicted RBP12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 MAP1LC3CQ9BXW4 147 aa12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 ST20Q9HBF5 79 aa12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 TIMM8BQ9Y5J9 83 aaPredicted RBP12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 LYPD1Q8N2G4 141 aa12.43□□□□□ -0.42
TSPAN4-211ENST00000468468 H0Y8G0 127 aa12.42□□□□□ -0.42
TSPAN4-211ENST00000468468 NBR2O15453 112 aa12.42□□□□□ -0.42
TSPAN4-211ENST00000468468 ZNF414Q96IQ9 312 aa12.42□□□□□ -0.42
TSPAN4-211ENST00000468468 MCRIP2Q9BUT9 160 aaKnown RBP12.42□□□□□ -0.42
TSPAN4-211ENST00000468468 M0R3E3 92 aa12.42□□□□□ -0.42
TSPAN4-211ENST00000468468 CRIP1P50238 77 aa12.42□□□□□ -0.42
TSPAN4-211ENST00000468468 TPPP3Q9BW30 176 aa12.42□□□□□ -0.42
TSPAN4-211ENST00000468468 SVEP1Q4LDE5 3571 aa12.42□□□□□ -0.42
TSPAN4-211ENST00000468468 ARF6P62330 175 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 DPM3Q9P2X0 92 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 MUC21A0A0G2JKD1 596 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 MUC21A0A140T8X8 626 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 MRPS12O15235 138 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 MUC21Q5SSG8 566 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 PET117Q6UWS5 81 aa12.41□□□□□ -0.42
TSPAN4-211ENST00000468468 HSPB8Q9UJY1 196 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms