RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 OR51G1Q8NGK1 321 aa2.81□□□□□ -1.96
HMGB1-207ENST00000468384 Q8TAT8 98 aa2.81□□□□□ -1.96
HMGB1-207ENST00000468384 ZC2HC1AQ96GY0 325 aa2.81□□□□□ -1.96
HMGB1-207ENST00000468384 TMEM56Q96MV1 263 aa2.81□□□□□ -1.96
HMGB1-207ENST00000468384 PDCD1LG2Q9BQ51 273 aa2.81□□□□□ -1.96
HMGB1-207ENST00000468384 ARL6Q9H0F7 186 aa2.81□□□□□ -1.96
HMGB1-207ENST00000468384 PLAC8Q9NZF1 115 aa2.81□□□□□ -1.96
HMGB1-207ENST00000468384 ICOSQ9Y6W8 199 aa2.81□□□□□ -1.96
HMGB1-207ENST00000468384 FAM240AA0A1B0GVK7 77 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 ZNF878C9JN71 531 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 AGPAT2O15120 278 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 KRT75O95678 551 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 APOC1P02654 83 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 CD37P11049 281 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 PSMD7P51665 324 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 TAS2R41P59536 307 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 POU2AF1Q16633 256 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 PRSS8Q16651 343 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 Q1RN00 199 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 Q6P435 159 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 SLC25A26Q70HW3 274 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 HSD17B13Q7Z5P4 300 aaPredicted RBP2.8□□□□□ -1.96
HMGB1-207ENST00000468384 MRPL55Q7Z7F7 128 aaKnown RBP2.8□□□□□ -1.96
HMGB1-207ENST00000468384 CCNYL1Q8N7R7 359 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 NKAPP1Q8N9T2 125 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 TEX47Q8TBZ9 253 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 ARL11Q969Q4 196 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 SMIM19Q96E16 107 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 TMEM208Q9BTX3 173 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 MRPS26Q9BYN8 205 aaKnown RBP2.8□□□□□ -1.96
HMGB1-207ENST00000468384 PLGRKTQ9HBL7 147 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 C8orf4Q9NR00 106 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 WASHC3Q9Y3C0 194 aa2.8□□□□□ -1.96
HMGB1-207ENST00000468384 TINCRA0A1B0GVN0 87 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 OR5H14A6NHG9 310 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 SNAPINO95295 136 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 NAPSAO96009 420 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 MT1FP04733 61 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 TYMSP04818 313 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 ISG15P05161 165 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 EIF4EP06730 217 aaKnown RBP2.79□□□□□ -1.96
HMGB1-207ENST00000468384 OR5AL1P0C617 328 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 OR4E1P0C645 316 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 CELP19835 753 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 GZMHP20718 246 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 PPIBP23284 216 aaKnown RBP2.79□□□□□ -1.96
HMGB1-207ENST00000468384 TSPOP30536 169 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 HRH1P35367 487 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 PPP1CCP36873 323 aaKnown RBP2.79□□□□□ -1.96
HMGB1-207ENST00000468384 AP2S1P53680 142 aaPredicted RBP2.79□□□□□ -1.96
HMGB1-207ENST00000468384 GUK1Q16774 197 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 RSBN1Q5VWQ0 802 aaPredicted RBP2.79□□□□□ -1.96
HMGB1-207ENST00000468384 OR2T5Q6IEZ7 315 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 DPPA3Q6W0C5 159 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 C9orf163Q8N9P6 203 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 CHST4Q8NCG5 386 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 CCDC54Q8NEL0 328 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 OR2T29Q8NH02 315 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 MAL2Q969L2 176 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 TMEM230Q96A57 120 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 RPUSD4Q96CM3 377 aaKnown RBP2.79□□□□□ -1.96
HMGB1-207ENST00000468384 L3HYPDHQ96EM0 354 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 APOL4Q9BPW4 351 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 GPR84Q9NQS5 396 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 ENOPH1Q9UHY7 261 aa2.79□□□□□ -1.96
HMGB1-207ENST00000468384 A6NDN8 102 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 PRORSD1PA6NEY8 169 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 H3BQF6 201 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 CRXO43186 299 aaPredicted RBP2.78□□□□□ -1.96
HMGB1-207ENST00000468384 SERF1AO75920 110 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 RLN2P04090 185 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 AZU1P20160 251 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 DTYMKP23919 212 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 PHBP35232 272 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 RANP62826 216 aaKnown RBP2.78□□□□□ -1.96
HMGB1-207ENST00000468384 LINC01556Q5JQF7 62 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 PSMG4Q5JS54 123 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 OAFQ86UD1 273 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 KRTAP11-1Q8IUC1 163 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 ZNF709Q8N972 641 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 OR10W1Q8NGF6 305 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 SRSF12Q8WXF0 261 aaKnown RBP2.78□□□□□ -1.96
HMGB1-207ENST00000468384 AP3S1Q92572 193 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 TESCQ96BS2 214 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 MRPS24Q96EL2 167 aaKnown RBP2.78□□□□□ -1.96
HMGB1-207ENST00000468384 MRAP2Q96G30 205 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 PPP3R2Q96LZ3 170 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 EBF4Q9BQW3 602 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 GFRA4Q9GZZ7 299 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 ARV1Q9H2C2 271 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 HMG20AQ9NP66 347 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 NUFIP1Q9UHK0 495 aaKnown RBP2.78□□□□□ -1.96
HMGB1-207ENST00000468384 ZNF257Q9Y2Q1 563 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 MED31Q9Y3C7 131 aa2.78□□□□□ -1.96
HMGB1-207ENST00000468384 IGKV1-27A0A075B6S5 117 aa2.77□□□□□ -1.97
HMGB1-207ENST00000468384 C5orf58C9J3I9 102 aa2.77□□□□□ -1.97
HMGB1-207ENST00000468384 TNFRSF11BO00300 401 aa2.77□□□□□ -1.97
HMGB1-207ENST00000468384 AZIN1O14977 448 aa2.77□□□□□ -1.97
HMGB1-207ENST00000468384 DEGS1O15121 323 aa2.77□□□□□ -1.97
HMGB1-207ENST00000468384 FABP7O15540 132 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms