RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TRAV8-2A0A0B4J237 113 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 H0YIZ8 118 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 GOSR2O14653 212 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 SIX6O95475 246 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 S100A11P31949 105 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 BCAP31P51572 246 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 H2BFSP57053 126 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 DEFB1P60022 68 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 S100A10P60903 97 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 NUTF2P61970 127 aaKnown RBP8.08□□□□□ -1.12
COL4A6-205ENST00000468338 CYCSP99999 105 aaKnown RBP8.08□□□□□ -1.12
COL4A6-205ENST00000468338 TMEM37Q8WXS4 190 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 C20orf173Q96LM9 149 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 LINC00052Q96N35 136 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 UHRF2Q96PU4 802 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 ARL6Q9H0F7 186 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 ARV1Q9H2C2 271 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 UQCC1Q9NVA1 299 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 A0A0J9YX75 114 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 DIRC3C9JPN6 131 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 NPIPB6E9PJ23 425 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 OR5G3P0C626 314 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 RPL29P47914 159 aaKnown RBP8.07□□□□□ -1.12
COL4A6-205ENST00000468338 CAMLGP49069 296 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 RAB31Q13636 194 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 ATP6V1FQ16864 119 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 S100A7AQ86SG5 101 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 STX12Q86Y82 276 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 ZNF709Q8N972 641 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 C1QTNF4Q9BXJ3 329 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 RNF24Q9Y225 148 aa8.07□□□□□ -1.12
COL4A6-205ENST00000468338 E5RGE8 158 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 F5H697 171 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 RBMY1A1P0DJD3 496 aaKnown RBP8.06□□□□□ -1.12
COL4A6-205ENST00000468338 RBMY1CP0DJD4 496 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 MIFP14174 115 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 HBG1P69891 147 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 HBG2P69892 147 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 OPCMLQ14982 345 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 RBMY1FQ15415 496 aaKnown RBP8.06□□□□□ -1.12
COL4A6-205ENST00000468338 MIC13Q5XKP0 118 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 ZNF705AQ6ZN79 300 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-205ENST00000468338 LINC00305Q7Z4B0 112 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 RNF126Q9BV68 326 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 HRH4Q9H3N8 390 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 RPRMQ9NS64 109 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 CLEC5AQ9NY25 188 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 OR5AC2Q9NZP5 309 aa8.06□□□□□ -1.12
COL4A6-205ENST00000468338 ZNF705FA8MVS1 300 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-205ENST00000468338 F6UB75 175 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 TRIAP1O43715 76 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 MPDU1O75352 247 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 RLN2P04090 185 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 ZNF705DP0CH99 300 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-205ENST00000468338 ZNF705BP0CI00 300 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-205ENST00000468338 CXCL3P19876 107 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 MORN5Q5VZ52 161 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 CEMP1Q6PRD7 247 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-205ENST00000468338 AMTNQ6UX39 209 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 PPP1R1CQ8WVI7 109 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 NEU1Q99519 415 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 DNAJC4Q9NNZ3 241 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 XCL2Q9UBD3 114 aa8.05□□□□□ -1.12
COL4A6-205ENST00000468338 IGHV4-28A0A0C4DH34 117 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 UBE2L5PA0A1B0GUS4 154 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 CXorf65A6NEN9 183 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 NUPR2A6NF83 97 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 COX7A2P2O60397 106 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 PTTG1O95997 202 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 CXCL2P19875 107 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 PSG9Q00887 426 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 BAXQ07812 192 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 LRRC37A5PQ49AS3 106 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 FAM78BQ5VT40 261 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 C10orf113Q5VZT2 155 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 IGFL4Q6B9Z1 124 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 EBLN2Q6P2I7 272 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 Q6ZRG5 221 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 OR5C1Q8NGR4 320 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 C11orf45Q8TAV5 145 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 SLC25A31Q9H0C2 315 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 SLC39A9Q9NUM3 307 aa8.04□□□□□ -1.12
COL4A6-205ENST00000468338 HYDINQ4G0P3 5121 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 DEFB4AO15263 64 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 SSNA1O43805 119 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 MPC2O95563 127 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 IGKV3-20P01619 116 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 IGLC2P0DOY2 106 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 B2MP61769 119 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 CFAP161Q6P656 301 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 LCN15Q6UWW0 184 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 BPIFA4PQ86YQ2 179 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 RNF182Q8N6D2 247 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 OR4B1Q8NGF8 309 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 OR1L4Q8NGR5 311 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 PHLDA1Q8WV24 401 aaPredicted RBP8.03□□□□□ -1.12
COL4A6-205ENST00000468338 SAT2Q96F10 170 aaPredicted RBP8.03□□□□□ -1.12
COL4A6-205ENST00000468338 PFDN5Q99471 154 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 NPCDR1Q9BY65 106 aa8.03□□□□□ -1.12
COL4A6-205ENST00000468338 MFFQ9GZY8 342 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms